Gene : Glyma.17G059600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33972:SF2 - EXPRESSED PROTEIN Genomic Order:  596
Name:  ? Glyma.17G059600 Secondary Identifier:  ? PAC:30481249
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G059600 0.5kb upstream 0.5kb upstream 1528   true Chr17: 4516087-4517614 Glycine max
Glyma.17G059600 0.5kb upstream 0.5kb upstream 500   false Chr17: 4517115-4517614 Glycine max
Glyma.17G059600 0.5kb downstream 0.5kb downstream 1528   true Chr17: 4515587-4517114 Glycine max
Glyma.17G059600 0.5kb downstream 0.5kb downstream 500   false Chr17: 4515587-4516086 Glycine max
Glyma.17G059600 1.0kb upstream 1.0kb upstream 2028   true Chr17: 4516087-4518114 Glycine max
Glyma.17G059600 1.0kb upstream 1.0kb upstream 1000   false Chr17: 4517115-4518114 Glycine max
Glyma.17G059600 1.0kb downstream 1.0kb downstream 2028   true Chr17: 4515087-4517114 Glycine max
Glyma.17G059600 1.0kb downstream 1.0kb downstream 1000   false Chr17: 4515087-4516086 Glycine max
Glyma.17G059600 2.0kb upstream 2.0kb upstream 3028   true Chr17: 4516087-4519114 Glycine max
Glyma.17G059600 2.0kb upstream 2.0kb upstream 2000   false Chr17: 4517115-4519114 Glycine max
Glyma.17G059600 2.0kb downstream 2.0kb downstream 3028   true Chr17: 4514087-4517114 Glycine max
Glyma.17G059600 2.0kb downstream 2.0kb downstream 2000   false Chr17: 4514087-4516086 Glycine max
Glyma.17G059600 5.0kb upstream 5.0kb upstream 6028   true Chr17: 4516087-4522114 Glycine max
Glyma.17G059600 5.0kb upstream 5.0kb upstream 5000   false Chr17: 4517115-4522114 Glycine max
Glyma.17G059600 5.0kb downstream 5.0kb downstream 6028   true Chr17: 4511087-4517114 Glycine max
Glyma.17G059600 5.0kb downstream 5.0kb downstream 5000   false Chr17: 4511087-4516086 Glycine max
Glyma.17G059600 10.0kb upstream 10.0kb upstream 11028   true Chr17: 4516087-4527114 Glycine max
Glyma.17G059600 10.0kb upstream 10.0kb upstream 10000   false Chr17: 4517115-4527114 Glycine max
Glyma.17G059600 10.0kb downstream 10.0kb downstream 11028   true Chr17: 4506087-4517114 Glycine max
Glyma.17G059600 10.0kb downstream 10.0kb downstream 10000   false Chr17: 4506087-4516086 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121611127 5273 Angiosperm Singleton cluster - no MSA
122244122 5265 Fabidae Singleton cluster - no MSA
123988496 5270 Rosid Singleton cluster - no MSA
123563672 5271 Pentapetalae Singleton cluster - no MSA
122598448 5272 Eudicot Singleton cluster - no MSA
120883362 5274 Embryophyte Singleton cluster - no MSA
122924184 5275 Viridiplantae Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.1634 0.0 86.2672    
cufflinks 15.3706 0.0 76.1157    
cufflinks 13.1841 0.0 68.4308   Low
cufflinks 14.731 0.0 73.4416    
cufflinks 16.7444 0.0 83.1095    
cufflinks 17.5319 0.0 77.1081    
cufflinks 22.1261 0.0 100.342 High High
cufflinks 17.0771 0.0 81.9019    
cufflinks 17.9974 0.0 85.1597    
cufflinks 1.568       Low
cufflinks 1.834        
cufflinks 1.78        
cufflinks 1.76        
cufflinks 2.006        
cufflinks 2.284        
cufflinks 3.169       High
cufflinks 1.114       Low
cufflinks 2.102        
cufflinks 2.171        
cufflinks 3.025       High
cufflinks 2.063        
cufflinks 3.524       High
cufflinks 1.998        
cufflinks 2.107        
cufflinks 2.954       High
cufflinks 1.94        

0 Strain