Gene : Glyma.17G060200 G. max Wm82.a2.v1
Defline:  (1 of 81) PF14009 - Domain of unknown function (DUF4228) (DUF4228) Genomic Order:  602
Name:  ? Glyma.17G060200 Secondary Identifier:  ? PAC:30478668
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G060200 0.5kb upstream 0.5kb upstream 1013   true Chr17: 4564429-4565441 Glycine max
Glyma.17G060200 0.5kb upstream 0.5kb upstream 500   false Chr17: 4564942-4565441 Glycine max
Glyma.17G060200 0.5kb downstream 0.5kb downstream 1013   true Chr17: 4563929-4564941 Glycine max
Glyma.17G060200 0.5kb downstream 0.5kb downstream 500   false Chr17: 4563929-4564428 Glycine max
Glyma.17G060200 1.0kb upstream 1.0kb upstream 1513   true Chr17: 4564429-4565941 Glycine max
Glyma.17G060200 1.0kb upstream 1.0kb upstream 1000   false Chr17: 4564942-4565941 Glycine max
Glyma.17G060200 1.0kb downstream 1.0kb downstream 1513   true Chr17: 4563429-4564941 Glycine max
Glyma.17G060200 1.0kb downstream 1.0kb downstream 1000   false Chr17: 4563429-4564428 Glycine max
Glyma.17G060200 2.0kb upstream 2.0kb upstream 2513   true Chr17: 4564429-4566941 Glycine max
Glyma.17G060200 2.0kb upstream 2.0kb upstream 2000   false Chr17: 4564942-4566941 Glycine max
Glyma.17G060200 2.0kb downstream 2.0kb downstream 2513   true Chr17: 4562429-4564941 Glycine max
Glyma.17G060200 2.0kb downstream 2.0kb downstream 2000   false Chr17: 4562429-4564428 Glycine max
Glyma.17G060200 5.0kb upstream 5.0kb upstream 5513   true Chr17: 4564429-4569941 Glycine max
Glyma.17G060200 5.0kb upstream 5.0kb upstream 5000   false Chr17: 4564942-4569941 Glycine max
Glyma.17G060200 5.0kb downstream 5.0kb downstream 5513   true Chr17: 4559429-4564941 Glycine max
Glyma.17G060200 5.0kb downstream 5.0kb downstream 5000   false Chr17: 4559429-4564428 Glycine max
Glyma.17G060200 10.0kb upstream 10.0kb upstream 10513   true Chr17: 4564429-4574941 Glycine max
Glyma.17G060200 10.0kb upstream 10.0kb upstream 10000   false Chr17: 4564942-4574941 Glycine max
Glyma.17G060200 10.0kb downstream 10.0kb downstream 10513   true Chr17: 4554429-4564941 Glycine max
Glyma.17G060200 10.0kb downstream 10.0kb downstream 10000   false Chr17: 4554429-4564428 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310121 5265 Fabidae View MSA
124069920 5270 Rosid View MSA
123747179 5271 Pentapetalae View MSA
122795412 5272 Eudicot View MSA
122048681 5273 Angiosperm View MSA
121311070 5274 Embryophyte View MSA
123348418 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.5724 0.0 63.6412   High
cufflinks 0.119252 0.0 0.509365 Low Low
cufflinks 0.633235 0.0 2.48739    
cufflinks 0.325833 0.0 1.30942    
cufflinks 1.03918 0.0 3.98866    
cufflinks 7.76794 0.0 26.3115   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.234681 0.0 0.95643    
cufflinks 2.80991 0.0 10.3045    
cufflinks 1.205        
cufflinks 13.609     High High
cufflinks 0.581        
cufflinks 3.233        
cufflinks 1.717        
cufflinks 1.325        
cufflinks 1.611        
cufflinks 4.397        
cufflinks 0.844        
cufflinks 0.698        
cufflinks 0.777        
cufflinks 52.621     High High
cufflinks 1.04        
cufflinks 0.333       Low
cufflinks 50.325     High High
cufflinks 0.811        
cufflinks 32.014     High High

0 Strain