Gene : Glyma.17G060300 G. max Wm82.a2.v1
Defline:  (1 of 62) PF02485 - Core-2/I-Branching enzyme (Branch) Genomic Order:  603
Name:  ? Glyma.17G060300 Secondary Identifier:  ? PAC:30482292
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G060300 0.5kb upstream 0.5kb upstream 7642   true Chr17: 4573720-4581361 Glycine max
Glyma.17G060300 0.5kb upstream 0.5kb upstream 500   false Chr17: 4573720-4574219 Glycine max
Glyma.17G060300 0.5kb downstream 0.5kb downstream 7642   true Chr17: 4574220-4581861 Glycine max
Glyma.17G060300 0.5kb downstream 0.5kb downstream 500   false Chr17: 4581362-4581861 Glycine max
Glyma.17G060300 1.0kb upstream 1.0kb upstream 8142   true Chr17: 4573220-4581361 Glycine max
Glyma.17G060300 1.0kb upstream 1.0kb upstream 1000   false Chr17: 4573220-4574219 Glycine max
Glyma.17G060300 1.0kb downstream 1.0kb downstream 8142   true Chr17: 4574220-4582361 Glycine max
Glyma.17G060300 1.0kb downstream 1.0kb downstream 1000   false Chr17: 4581362-4582361 Glycine max
Glyma.17G060300 2.0kb upstream 2.0kb upstream 9142   true Chr17: 4572220-4581361 Glycine max
Glyma.17G060300 2.0kb upstream 2.0kb upstream 2000   false Chr17: 4572220-4574219 Glycine max
Glyma.17G060300 2.0kb downstream 2.0kb downstream 9142   true Chr17: 4574220-4583361 Glycine max
Glyma.17G060300 2.0kb downstream 2.0kb downstream 2000   false Chr17: 4581362-4583361 Glycine max
Glyma.17G060300 5.0kb upstream 5.0kb upstream 12142   true Chr17: 4569220-4581361 Glycine max
Glyma.17G060300 5.0kb upstream 5.0kb upstream 5000   false Chr17: 4569220-4574219 Glycine max
Glyma.17G060300 5.0kb downstream 5.0kb downstream 12142   true Chr17: 4574220-4586361 Glycine max
Glyma.17G060300 5.0kb downstream 5.0kb downstream 5000   false Chr17: 4581362-4586361 Glycine max
Glyma.17G060300 10.0kb upstream 10.0kb upstream 17142   true Chr17: 4564220-4581361 Glycine max
Glyma.17G060300 10.0kb upstream 10.0kb upstream 10000   false Chr17: 4564220-4574219 Glycine max
Glyma.17G060300 10.0kb downstream 10.0kb downstream 17142   true Chr17: 4574220-4591361 Glycine max
Glyma.17G060300 10.0kb downstream 10.0kb downstream 10000   false Chr17: 4581362-4591361 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307651 5265 Fabidae View MSA
124069313 5270 Rosid View MSA
123745528 5271 Pentapetalae View MSA
122791834 5272 Eudicot View MSA
122045211 5273 Angiosperm View MSA
121345766 5274 Embryophyte View MSA
123428085 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.2301 0.0 58.5819    
cufflinks 8.40728 0.0 40.3604    
cufflinks 13.8048 0.0 60.1831    
cufflinks 8.65333 0.0 41.2109    
cufflinks 10.6644 0.0 49.3036    
cufflinks 18.9591 0.0 76.8793   High
cufflinks 6.05373 0.0 31.7526   Low
cufflinks 11.119 0.0 54.7219    
cufflinks 11.5122 0.0 53.0737    
cufflinks 0.41        
cufflinks 1.382       High
cufflinks 0.463        
cufflinks 0.58        
cufflinks 0.468        
cufflinks 0.547        
cufflinks 0.349        
cufflinks 0.729        
cufflinks 0.505        
cufflinks 0.333       Low
cufflinks 0.375        
cufflinks 1.083       High
cufflinks 0.445        
cufflinks 0.377        
cufflinks 1.507       High
cufflinks 0.374        
cufflinks 1.035       High

0 Strain