Gene : Glyma.17G061300 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11122//PTHR11122:SF22 - APOSPORY-ASSOCIATED PROTEIN C-RELATED Genomic Order:  613
Name:  ? Glyma.17G061300 Secondary Identifier:  ? PAC:30478731
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G061300 0.5kb upstream 0.5kb upstream 7606   true Chr17: 4667213-4674818 Glycine max
Glyma.17G061300 0.5kb upstream 0.5kb upstream 500   false Chr17: 4667213-4667712 Glycine max
Glyma.17G061300 0.5kb downstream 0.5kb downstream 7606   true Chr17: 4667713-4675318 Glycine max
Glyma.17G061300 0.5kb downstream 0.5kb downstream 500   false Chr17: 4674819-4675318 Glycine max
Glyma.17G061300 1.0kb upstream 1.0kb upstream 8106   true Chr17: 4666713-4674818 Glycine max
Glyma.17G061300 1.0kb upstream 1.0kb upstream 1000   false Chr17: 4666713-4667712 Glycine max
Glyma.17G061300 1.0kb downstream 1.0kb downstream 8106   true Chr17: 4667713-4675818 Glycine max
Glyma.17G061300 1.0kb downstream 1.0kb downstream 1000   false Chr17: 4674819-4675818 Glycine max
Glyma.17G061300 2.0kb upstream 2.0kb upstream 9106   true Chr17: 4665713-4674818 Glycine max
Glyma.17G061300 2.0kb upstream 2.0kb upstream 2000   false Chr17: 4665713-4667712 Glycine max
Glyma.17G061300 2.0kb downstream 2.0kb downstream 9106   true Chr17: 4667713-4676818 Glycine max
Glyma.17G061300 2.0kb downstream 2.0kb downstream 2000   false Chr17: 4674819-4676818 Glycine max
Glyma.17G061300 5.0kb upstream 5.0kb upstream 12106   true Chr17: 4662713-4674818 Glycine max
Glyma.17G061300 5.0kb upstream 5.0kb upstream 5000   false Chr17: 4662713-4667712 Glycine max
Glyma.17G061300 5.0kb downstream 5.0kb downstream 12106   true Chr17: 4667713-4679818 Glycine max
Glyma.17G061300 5.0kb downstream 5.0kb downstream 5000   false Chr17: 4674819-4679818 Glycine max
Glyma.17G061300 10.0kb upstream 10.0kb upstream 17106   true Chr17: 4657713-4674818 Glycine max
Glyma.17G061300 10.0kb upstream 10.0kb upstream 10000   false Chr17: 4657713-4667712 Glycine max
Glyma.17G061300 10.0kb downstream 10.0kb downstream 17106   true Chr17: 4667713-4684818 Glycine max
Glyma.17G061300 10.0kb downstream 10.0kb downstream 10000   false Chr17: 4674819-4684818 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250117 5265 Fabidae View MSA
124064506 5270 Rosid View MSA
123740956 5271 Pentapetalae View MSA
122787587 5272 Eudicot View MSA
122047038 5273 Angiosperm View MSA
121347358 5274 Embryophyte View MSA
123428689 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.5164 0.0 61.9853   Low
cufflinks 29.8313 0.0 131.128 High  
cufflinks 31.1261 0.0 135.57 High  
cufflinks 43.2264 0.0 199.886 High High
cufflinks 25.6169 0.0 110.516 High  
cufflinks 21.2787 0.0 89.4968    
cufflinks 43.655 0.0 200.857 High High
cufflinks 44.5194 0.0 206.209 High High
cufflinks 16.0192 0.0 55.1847   Low
cufflinks 2.591        
cufflinks 0.498       Low
cufflinks 1.542        
cufflinks 1.811        
cufflinks 2.216        
cufflinks 0.246       Low
cufflinks 2.311        
cufflinks 0.628       Low
cufflinks 2.228        
cufflinks 2.176        
cufflinks 1.959        
cufflinks 0.903        
cufflinks 2.142        
cufflinks 2.054        
cufflinks 0.521       Low
cufflinks 2.119        
cufflinks 0.66        

0 Strain