Gene : Glyma.17G062000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR23244//PTHR23244:SF326 - KELCH REPEAT DOMAIN Genomic Order:  620
Name:  ? Glyma.17G062000 Secondary Identifier:  ? PAC:30480171
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G062000 0.5kb upstream 0.5kb upstream 5007   true Chr17: 4744351-4749357 Glycine max
Glyma.17G062000 0.5kb upstream 0.5kb upstream 500   false Chr17: 4744351-4744850 Glycine max
Glyma.17G062000 0.5kb downstream 0.5kb downstream 5007   true Chr17: 4744851-4749857 Glycine max
Glyma.17G062000 0.5kb downstream 0.5kb downstream 500   false Chr17: 4749358-4749857 Glycine max
Glyma.17G062000 1.0kb upstream 1.0kb upstream 5507   true Chr17: 4743851-4749357 Glycine max
Glyma.17G062000 1.0kb upstream 1.0kb upstream 1000   false Chr17: 4743851-4744850 Glycine max
Glyma.17G062000 1.0kb downstream 1.0kb downstream 5507   true Chr17: 4744851-4750357 Glycine max
Glyma.17G062000 1.0kb downstream 1.0kb downstream 1000   false Chr17: 4749358-4750357 Glycine max
Glyma.17G062000 2.0kb upstream 2.0kb upstream 6507   true Chr17: 4742851-4749357 Glycine max
Glyma.17G062000 2.0kb upstream 2.0kb upstream 2000   false Chr17: 4742851-4744850 Glycine max
Glyma.17G062000 2.0kb downstream 2.0kb downstream 6507   true Chr17: 4744851-4751357 Glycine max
Glyma.17G062000 2.0kb downstream 2.0kb downstream 2000   false Chr17: 4749358-4751357 Glycine max
Glyma.17G062000 5.0kb upstream 5.0kb upstream 9507   true Chr17: 4739851-4749357 Glycine max
Glyma.17G062000 5.0kb upstream 5.0kb upstream 5000   false Chr17: 4739851-4744850 Glycine max
Glyma.17G062000 5.0kb downstream 5.0kb downstream 9507   true Chr17: 4744851-4754357 Glycine max
Glyma.17G062000 5.0kb downstream 5.0kb downstream 5000   false Chr17: 4749358-4754357 Glycine max
Glyma.17G062000 10.0kb upstream 10.0kb upstream 14507   true Chr17: 4734851-4749357 Glycine max
Glyma.17G062000 10.0kb upstream 10.0kb upstream 10000   false Chr17: 4734851-4744850 Glycine max
Glyma.17G062000 10.0kb downstream 10.0kb downstream 14507   true Chr17: 4744851-4759357 Glycine max
Glyma.17G062000 10.0kb downstream 10.0kb downstream 10000   false Chr17: 4749358-4759357 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309494 5265 Fabidae View MSA
124068680 5270 Rosid View MSA
123751990 5271 Pentapetalae View MSA
122789390 5272 Eudicot View MSA
122047758 5273 Angiosperm View MSA
121310788 5274 Embryophyte View MSA
123428379 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.9733 0.0 37.3431    
cufflinks 10.5582 0.0 28.1859    
cufflinks 13.3635 0.0 35.6874    
cufflinks 14.3048 0.0 38.2398   High
cufflinks 8.80019 0.0 23.5661    
cufflinks 8.25423 0.0 22.1482   Low
cufflinks 10.6939 0.0 28.5404    
cufflinks 14.762 0.0 39.4968   High
cufflinks 7.82911 0.0 21.0501   Low
cufflinks 5.329        
cufflinks 4.286        
cufflinks 8.273     High High
cufflinks 3.327       Low
cufflinks 3.732       Low
cufflinks 4.242        
cufflinks 7.549     High  
cufflinks 4.155        
cufflinks 9.925     High High
cufflinks 7.378        
cufflinks 8.763     High High
cufflinks 5.165        
cufflinks 7.865     High  
cufflinks 8.583     High High
cufflinks 4.683        
cufflinks 7.206     High  
cufflinks 4.297        

0 Strain