Gene : Glyma.17G063600 G. max Wm82.a2.v1
Defline:  (1 of 10) PF09177 - Syntaxin 6, N-terminal (Syntaxin-6_N) Genomic Order:  636
Name:  ? Glyma.17G063600 Secondary Identifier:  ? PAC:30478844
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G063600 0.5kb upstream 0.5kb upstream 2398   true Chr17: 4891509-4893906 Glycine max
Glyma.17G063600 0.5kb upstream 0.5kb upstream 500   false Chr17: 4893407-4893906 Glycine max
Glyma.17G063600 0.5kb downstream 0.5kb downstream 2398   true Chr17: 4891009-4893406 Glycine max
Glyma.17G063600 0.5kb downstream 0.5kb downstream 500   false Chr17: 4891009-4891508 Glycine max
Glyma.17G063600 1.0kb upstream 1.0kb upstream 2898   true Chr17: 4891509-4894406 Glycine max
Glyma.17G063600 1.0kb upstream 1.0kb upstream 1000   false Chr17: 4893407-4894406 Glycine max
Glyma.17G063600 1.0kb downstream 1.0kb downstream 2898   true Chr17: 4890509-4893406 Glycine max
Glyma.17G063600 1.0kb downstream 1.0kb downstream 1000   false Chr17: 4890509-4891508 Glycine max
Glyma.17G063600 2.0kb upstream 2.0kb upstream 3898   true Chr17: 4891509-4895406 Glycine max
Glyma.17G063600 2.0kb upstream 2.0kb upstream 2000   false Chr17: 4893407-4895406 Glycine max
Glyma.17G063600 2.0kb downstream 2.0kb downstream 3898   true Chr17: 4889509-4893406 Glycine max
Glyma.17G063600 2.0kb downstream 2.0kb downstream 2000   false Chr17: 4889509-4891508 Glycine max
Glyma.17G063600 5.0kb upstream 5.0kb upstream 6898   true Chr17: 4891509-4898406 Glycine max
Glyma.17G063600 5.0kb upstream 5.0kb upstream 5000   false Chr17: 4893407-4898406 Glycine max
Glyma.17G063600 5.0kb downstream 5.0kb downstream 6898   true Chr17: 4886509-4893406 Glycine max
Glyma.17G063600 5.0kb downstream 5.0kb downstream 5000   false Chr17: 4886509-4891508 Glycine max
Glyma.17G063600 10.0kb upstream 10.0kb upstream 11898   true Chr17: 4891509-4903406 Glycine max
Glyma.17G063600 10.0kb upstream 10.0kb upstream 10000   false Chr17: 4893407-4903406 Glycine max
Glyma.17G063600 10.0kb downstream 10.0kb downstream 11898   true Chr17: 4881509-4893406 Glycine max
Glyma.17G063600 10.0kb downstream 10.0kb downstream 10000   false Chr17: 4881509-4891508 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305372 5265 Fabidae View MSA
124050806 5270 Rosid View MSA
123751797 5271 Pentapetalae View MSA
122791749 5272 Eudicot View MSA
122042907 5273 Angiosperm View MSA
121348883 5274 Embryophyte View MSA
123381058 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.8594 0.0 59.3415    
cufflinks 10.5177 0.0 33.3722   Low
cufflinks 19.4562 0.0 57.6946    
cufflinks 17.4711 0.0 52.405    
cufflinks 15.4711 0.0 46.7841    
cufflinks 17.6038 0.0 52.9881    
cufflinks 9.09105 0.0 29.6227   Low
cufflinks 17.0341 0.0 51.3026    
cufflinks 23.9966 0.0 71.281 High High
cufflinks 15.654     High Low
cufflinks 58.249     High High
cufflinks 23.041     High  
cufflinks 28.502     High  
cufflinks 18.007     High Low
cufflinks 52.85     High  
cufflinks 39.467     High  
cufflinks 48.423     High  
cufflinks 19.256     High Low
cufflinks 17.268     High Low
cufflinks 35.945     High  
cufflinks 65.175     High High
cufflinks 31.461     High  
cufflinks 16.87     High Low
cufflinks 68.708     High High
cufflinks 43.586     High  
cufflinks 73.001     High High

0 Strain