Gene : Glyma.17G104200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12136//PTHR12136:SF49 - STEROIDOGENIC ACUTE REGULATORY PROTEIN STAR Genomic Order:  1042
Name:  ? Glyma.17G104200 Secondary Identifier:  ? PAC:30482391
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G104200 0.5kb upstream 0.5kb upstream 22739   true Chr17: 8185783-8208521 Glycine max
Glyma.17G104200 0.5kb upstream 0.5kb upstream 500   false Chr17: 8208022-8208521 Glycine max
Glyma.17G104200 0.5kb downstream 0.5kb downstream 22739   true Chr17: 8185283-8208021 Glycine max
Glyma.17G104200 0.5kb downstream 0.5kb downstream 500   false Chr17: 8185283-8185782 Glycine max
Glyma.17G104200 1.0kb upstream 1.0kb upstream 23239   true Chr17: 8185783-8209021 Glycine max
Glyma.17G104200 1.0kb upstream 1.0kb upstream 1000   false Chr17: 8208022-8209021 Glycine max
Glyma.17G104200 1.0kb downstream 1.0kb downstream 23239   true Chr17: 8184783-8208021 Glycine max
Glyma.17G104200 1.0kb downstream 1.0kb downstream 1000   false Chr17: 8184783-8185782 Glycine max
Glyma.17G104200 2.0kb upstream 2.0kb upstream 24239   true Chr17: 8185783-8210021 Glycine max
Glyma.17G104200 2.0kb upstream 2.0kb upstream 2000   false Chr17: 8208022-8210021 Glycine max
Glyma.17G104200 2.0kb downstream 2.0kb downstream 24239   true Chr17: 8183783-8208021 Glycine max
Glyma.17G104200 2.0kb downstream 2.0kb downstream 2000   false Chr17: 8183783-8185782 Glycine max
Glyma.17G104200 5.0kb upstream 5.0kb upstream 27239   true Chr17: 8185783-8213021 Glycine max
Glyma.17G104200 5.0kb upstream 5.0kb upstream 5000   false Chr17: 8208022-8213021 Glycine max
Glyma.17G104200 5.0kb downstream 5.0kb downstream 27239   true Chr17: 8180783-8208021 Glycine max
Glyma.17G104200 5.0kb downstream 5.0kb downstream 5000   false Chr17: 8180783-8185782 Glycine max
Glyma.17G104200 10.0kb upstream 10.0kb upstream 32239   true Chr17: 8185783-8218021 Glycine max
Glyma.17G104200 10.0kb upstream 10.0kb upstream 10000   false Chr17: 8208022-8218021 Glycine max
Glyma.17G104200 10.0kb downstream 10.0kb downstream 32239   true Chr17: 8175783-8208021 Glycine max
Glyma.17G104200 10.0kb downstream 10.0kb downstream 10000   false Chr17: 8175783-8185782 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309252 5265 Fabidae View MSA
124075658 5270 Rosid View MSA
123742206 5271 Pentapetalae View MSA
122790410 5272 Eudicot View MSA
122042175 5273 Angiosperm View MSA
121350170 5274 Embryophyte View MSA
123428121 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.5501 0.0 41.8374   High
cufflinks 8.73748 0.0 23.3439    
cufflinks 10.9433 0.0 29.2084    
cufflinks 13.9695 0.0 37.4523   High
cufflinks 6.41645 0.0 17.3325   Low
cufflinks 8.13033 0.0 21.758    
cufflinks 9.34858 0.0 24.9613    
cufflinks 11.5299 0.0 30.7801    
cufflinks 5.15243 0.0 14.0903   Low
cufflinks 1.588        
cufflinks 0.35       Low
cufflinks 2.007       High
cufflinks 1.095        
cufflinks 0.744        
cufflinks 0.341       Low
cufflinks 1.087        
cufflinks 0.952        
cufflinks 1.74       High
cufflinks 1.463        
cufflinks 1.379        
cufflinks 0.333       Low
cufflinks 1.34        
cufflinks 1.108        
cufflinks 0.485       Low
cufflinks 1.22        
cufflinks 0.668        

0 Strain