Gene : Glyma.17G107000 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR12294//PTHR12294:SF12 - EF HAND DOMAIN FAMILY A1,A2-RELATED Genomic Order:  1070
Name:  ? Glyma.17G107000 Secondary Identifier:  ? PAC:30481794
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G107000 0.5kb upstream 0.5kb upstream 3788   true Chr17: 8401545-8405332 Glycine max
Glyma.17G107000 0.5kb upstream 0.5kb upstream 500   false Chr17: 8401545-8402044 Glycine max
Glyma.17G107000 0.5kb downstream 0.5kb downstream 3788   true Chr17: 8402045-8405832 Glycine max
Glyma.17G107000 0.5kb downstream 0.5kb downstream 500   false Chr17: 8405333-8405832 Glycine max
Glyma.17G107000 1.0kb upstream 1.0kb upstream 4288   true Chr17: 8401045-8405332 Glycine max
Glyma.17G107000 1.0kb upstream 1.0kb upstream 1000   false Chr17: 8401045-8402044 Glycine max
Glyma.17G107000 1.0kb downstream 1.0kb downstream 4288   true Chr17: 8402045-8406332 Glycine max
Glyma.17G107000 1.0kb downstream 1.0kb downstream 1000   false Chr17: 8405333-8406332 Glycine max
Glyma.17G107000 2.0kb upstream 2.0kb upstream 5288   true Chr17: 8400045-8405332 Glycine max
Glyma.17G107000 2.0kb upstream 2.0kb upstream 2000   false Chr17: 8400045-8402044 Glycine max
Glyma.17G107000 2.0kb downstream 2.0kb downstream 5288   true Chr17: 8402045-8407332 Glycine max
Glyma.17G107000 2.0kb downstream 2.0kb downstream 2000   false Chr17: 8405333-8407332 Glycine max
Glyma.17G107000 5.0kb upstream 5.0kb upstream 8288   true Chr17: 8397045-8405332 Glycine max
Glyma.17G107000 5.0kb upstream 5.0kb upstream 5000   false Chr17: 8397045-8402044 Glycine max
Glyma.17G107000 5.0kb downstream 5.0kb downstream 8288   true Chr17: 8402045-8410332 Glycine max
Glyma.17G107000 5.0kb downstream 5.0kb downstream 5000   false Chr17: 8405333-8410332 Glycine max
Glyma.17G107000 10.0kb upstream 10.0kb upstream 13288   true Chr17: 8392045-8405332 Glycine max
Glyma.17G107000 10.0kb upstream 10.0kb upstream 10000   false Chr17: 8392045-8402044 Glycine max
Glyma.17G107000 10.0kb downstream 10.0kb downstream 13288   true Chr17: 8402045-8415332 Glycine max
Glyma.17G107000 10.0kb downstream 10.0kb downstream 10000   false Chr17: 8405333-8415332 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302172 5265 Fabidae View MSA
124073183 5270 Rosid View MSA
123742641 5271 Pentapetalae View MSA
122790177 5272 Eudicot View MSA
122041646 5273 Angiosperm View MSA
121347886 5274 Embryophyte View MSA
123424828 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.138559 0.0 0.548891 Low  
cufflinks 0.31314 0.0 1.20006   High
cufflinks 0.146858 0.0 0.57964 Low  
cufflinks 0.0919914 0.0 0.369684 Low  
cufflinks 0.102949 0.0 0.412304 Low  
cufflinks 0.0319714 0.0 0.137014 Low Low
cufflinks 0.274181 0.0 1.05816    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.219197 0.0 0.852942 Low  
cufflinks 0.01     Low Low
cufflinks 0.093        
cufflinks 0.16        
cufflinks 0.019     Low Low
cufflinks 0.022     Low Low
cufflinks 0.555       High
cufflinks 0.211        
cufflinks 0.093        
cufflinks 0.176        
cufflinks 0.497       High
cufflinks 0.225        
cufflinks 0.187        
cufflinks 0.269        
cufflinks 0.198        
cufflinks 0.098        
cufflinks 0.256        
cufflinks 0.158        

0 Strain