Gene : Glyma.17G107200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR30508:SF1 - UPF0051 PROTEIN ABCI8, CHLOROPLASTIC-RELATED Genomic Order:  1072
Name:  ? Glyma.17G107200 Secondary Identifier:  ? PAC:30481183
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G107200 0.5kb upstream 0.5kb upstream 2910   true Chr17: 8416408-8419317 Glycine max
Glyma.17G107200 0.5kb upstream 0.5kb upstream 500   false Chr17: 8416408-8416907 Glycine max
Glyma.17G107200 0.5kb downstream 0.5kb downstream 2910   true Chr17: 8416908-8419817 Glycine max
Glyma.17G107200 0.5kb downstream 0.5kb downstream 500   false Chr17: 8419318-8419817 Glycine max
Glyma.17G107200 1.0kb upstream 1.0kb upstream 3410   true Chr17: 8415908-8419317 Glycine max
Glyma.17G107200 1.0kb upstream 1.0kb upstream 1000   false Chr17: 8415908-8416907 Glycine max
Glyma.17G107200 1.0kb downstream 1.0kb downstream 3410   true Chr17: 8416908-8420317 Glycine max
Glyma.17G107200 1.0kb downstream 1.0kb downstream 1000   false Chr17: 8419318-8420317 Glycine max
Glyma.17G107200 2.0kb upstream 2.0kb upstream 4410   true Chr17: 8414908-8419317 Glycine max
Glyma.17G107200 2.0kb upstream 2.0kb upstream 2000   false Chr17: 8414908-8416907 Glycine max
Glyma.17G107200 2.0kb downstream 2.0kb downstream 4410   true Chr17: 8416908-8421317 Glycine max
Glyma.17G107200 2.0kb downstream 2.0kb downstream 2000   false Chr17: 8419318-8421317 Glycine max
Glyma.17G107200 5.0kb upstream 5.0kb upstream 7410   true Chr17: 8411908-8419317 Glycine max
Glyma.17G107200 5.0kb upstream 5.0kb upstream 5000   false Chr17: 8411908-8416907 Glycine max
Glyma.17G107200 5.0kb downstream 5.0kb downstream 7410   true Chr17: 8416908-8424317 Glycine max
Glyma.17G107200 5.0kb downstream 5.0kb downstream 5000   false Chr17: 8419318-8424317 Glycine max
Glyma.17G107200 10.0kb upstream 10.0kb upstream 12410   true Chr17: 8406908-8419317 Glycine max
Glyma.17G107200 10.0kb upstream 10.0kb upstream 10000   false Chr17: 8406908-8416907 Glycine max
Glyma.17G107200 10.0kb downstream 10.0kb downstream 12410   true Chr17: 8416908-8429317 Glycine max
Glyma.17G107200 10.0kb downstream 10.0kb downstream 10000   false Chr17: 8419318-8429317 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305326 5265 Fabidae View MSA
124060841 5270 Rosid View MSA
123742833 5271 Pentapetalae View MSA
122792679 5272 Eudicot View MSA
122051474 5273 Angiosperm View MSA
121345946 5274 Embryophyte View MSA
123424242 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.3964 0.0 38.4195   High
cufflinks 6.89229 0.0 19.071   Low
cufflinks 11.7754 0.0 31.6144    
cufflinks 13.6653 0.0 36.5034   High
cufflinks 8.09988 0.0 22.0255    
cufflinks 10.5773 0.0 28.4328    
cufflinks 12.4437 0.0 33.2726    
cufflinks 10.0527 0.0 27.1131    
cufflinks 8.0599 0.0 21.9858    
cufflinks 9.875     High  
cufflinks 15.48     High  
cufflinks 19.429     High High
cufflinks 5.135       Low
cufflinks 3.646       Low
cufflinks 16.57     High  
cufflinks 13.2     High  
cufflinks 20.606     High High
cufflinks 13.126     High  
cufflinks 7.495     High  
cufflinks 12.776     High  
cufflinks 15.38     High  
cufflinks 13.227     High  
cufflinks 9.427     High  
cufflinks 13.361     High  
cufflinks 12.6     High  
cufflinks 11.919     High  

0 Strain