Gene : Glyma.17G109500 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG1012//KOG1328 - Ca2+-dependent lipid-binding protein CLB1/vesicle protein vp115/Granuphilin A, contains C2 domain // Synaptic vesicle protein BAIAP3, involved in vesicle priming/regulation Genomic Order:  1095
Name:  ? Glyma.17G109500 Secondary Identifier:  ? PAC:30482072
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G109500 0.5kb upstream 0.5kb upstream 9048   true Chr17: 8574055-8583102 Glycine max
Glyma.17G109500 0.5kb upstream 0.5kb upstream 500   false Chr17: 8582603-8583102 Glycine max
Glyma.17G109500 0.5kb downstream 0.5kb downstream 9048   true Chr17: 8573555-8582602 Glycine max
Glyma.17G109500 0.5kb downstream 0.5kb downstream 500   false Chr17: 8573555-8574054 Glycine max
Glyma.17G109500 1.0kb upstream 1.0kb upstream 9548   true Chr17: 8574055-8583602 Glycine max
Glyma.17G109500 1.0kb upstream 1.0kb upstream 1000   false Chr17: 8582603-8583602 Glycine max
Glyma.17G109500 1.0kb downstream 1.0kb downstream 9548   true Chr17: 8573055-8582602 Glycine max
Glyma.17G109500 1.0kb downstream 1.0kb downstream 1000   false Chr17: 8573055-8574054 Glycine max
Glyma.17G109500 2.0kb upstream 2.0kb upstream 10548   true Chr17: 8574055-8584602 Glycine max
Glyma.17G109500 2.0kb upstream 2.0kb upstream 2000   false Chr17: 8582603-8584602 Glycine max
Glyma.17G109500 2.0kb downstream 2.0kb downstream 10548   true Chr17: 8572055-8582602 Glycine max
Glyma.17G109500 2.0kb downstream 2.0kb downstream 2000   false Chr17: 8572055-8574054 Glycine max
Glyma.17G109500 5.0kb upstream 5.0kb upstream 13548   true Chr17: 8574055-8587602 Glycine max
Glyma.17G109500 5.0kb upstream 5.0kb upstream 5000   false Chr17: 8582603-8587602 Glycine max
Glyma.17G109500 5.0kb downstream 5.0kb downstream 13548   true Chr17: 8569055-8582602 Glycine max
Glyma.17G109500 5.0kb downstream 5.0kb downstream 5000   false Chr17: 8569055-8574054 Glycine max
Glyma.17G109500 10.0kb upstream 10.0kb upstream 18548   true Chr17: 8574055-8592602 Glycine max
Glyma.17G109500 10.0kb upstream 10.0kb upstream 10000   false Chr17: 8582603-8592602 Glycine max
Glyma.17G109500 10.0kb downstream 10.0kb downstream 18548   true Chr17: 8564055-8582602 Glycine max
Glyma.17G109500 10.0kb downstream 10.0kb downstream 10000   false Chr17: 8564055-8574054 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312116 5265 Fabidae View MSA
124064660 5270 Rosid View MSA
123752757 5271 Pentapetalae View MSA
122788574 5272 Eudicot View MSA
122044144 5273 Angiosperm View MSA
123429031 5275 Viridiplantae View MSA
121350044 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.0772 0.0 70.0982 High  
cufflinks 29.3402 0.0 79.3707 High  
cufflinks 23.0545 0.0 61.7988 High  
cufflinks 32.6414 0.0 88.8763 High High
cufflinks 23.4966 0.0 62.9165 High  
cufflinks 20.5105 0.0 54.7878   Low
cufflinks 30.4328 0.0 82.3559 High  
cufflinks 33.6612 0.0 91.8392 High High
cufflinks 23.976 0.0 64.2802 High  
cufflinks 9.218     High  
cufflinks 3.656       Low
cufflinks 7.315     High  
cufflinks 5.178        
cufflinks 5.22        
cufflinks 5.27     High  
cufflinks 11.584     High High
cufflinks 5.207        
cufflinks 8.121     High  
cufflinks 8.97     High  
cufflinks 12.183     High High
cufflinks 5.712        
cufflinks 12.533     High High
cufflinks 11.527     High High
cufflinks 3.831       Low
cufflinks 11.663     High High
cufflinks 4.291       Low

0 Strain