Gene : Glyma.17G109700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12526//PTHR12526:SF334 - GLYCOSYLTRANSFERASE Genomic Order:  1097
Name:  ? Glyma.17G109700 Secondary Identifier:  ? PAC:30482408
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7238 Glycine max pathologic  
Gmax SUCSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G109700 0.5kb upstream 0.5kb upstream 7073   true Chr17: 8601974-8609046 Glycine max
Glyma.17G109700 0.5kb upstream 0.5kb upstream 500   false Chr17: 8601974-8602473 Glycine max
Glyma.17G109700 0.5kb downstream 0.5kb downstream 7073   true Chr17: 8602474-8609546 Glycine max
Glyma.17G109700 0.5kb downstream 0.5kb downstream 500   false Chr17: 8609047-8609546 Glycine max
Glyma.17G109700 1.0kb upstream 1.0kb upstream 7573   true Chr17: 8601474-8609046 Glycine max
Glyma.17G109700 1.0kb upstream 1.0kb upstream 1000   false Chr17: 8601474-8602473 Glycine max
Glyma.17G109700 1.0kb downstream 1.0kb downstream 7573   true Chr17: 8602474-8610046 Glycine max
Glyma.17G109700 1.0kb downstream 1.0kb downstream 1000   false Chr17: 8609047-8610046 Glycine max
Glyma.17G109700 2.0kb upstream 2.0kb upstream 8573   true Chr17: 8600474-8609046 Glycine max
Glyma.17G109700 2.0kb upstream 2.0kb upstream 2000   false Chr17: 8600474-8602473 Glycine max
Glyma.17G109700 2.0kb downstream 2.0kb downstream 8573   true Chr17: 8602474-8611046 Glycine max
Glyma.17G109700 2.0kb downstream 2.0kb downstream 2000   false Chr17: 8609047-8611046 Glycine max
Glyma.17G109700 5.0kb upstream 5.0kb upstream 11573   true Chr17: 8597474-8609046 Glycine max
Glyma.17G109700 5.0kb upstream 5.0kb upstream 5000   false Chr17: 8597474-8602473 Glycine max
Glyma.17G109700 5.0kb downstream 5.0kb downstream 11573   true Chr17: 8602474-8614046 Glycine max
Glyma.17G109700 5.0kb downstream 5.0kb downstream 5000   false Chr17: 8609047-8614046 Glycine max
Glyma.17G109700 10.0kb upstream 10.0kb upstream 16573   true Chr17: 8592474-8609046 Glycine max
Glyma.17G109700 10.0kb upstream 10.0kb upstream 10000   false Chr17: 8592474-8602473 Glycine max
Glyma.17G109700 10.0kb downstream 10.0kb downstream 16573   true Chr17: 8602474-8619046 Glycine max
Glyma.17G109700 10.0kb downstream 10.0kb downstream 10000   false Chr17: 8609047-8619046 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306114 5265 Fabidae View MSA
124062800 5270 Rosid View MSA
123741512 5271 Pentapetalae View MSA
122790617 5272 Eudicot View MSA
122047849 5273 Angiosperm View MSA
121310805 5274 Embryophyte View MSA
123348202 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.681 0.0 40.2566    
cufflinks 14.7215 0.0 40.3463    
cufflinks 15.4999 0.0 42.7391    
cufflinks 40.6671 0.0 127.681 High High
cufflinks 27.5562 0.0 81.1923 High  
cufflinks 13.1643 0.0 35.8151   Low
cufflinks 26.2345 0.0 76.6708 High  
cufflinks 16.8857 0.0 46.8768    
cufflinks 17.8357 0.0 49.7777    
cufflinks 12.577     High  
cufflinks 2.627       Low
cufflinks 16.863     High  
cufflinks 14.792     High  
cufflinks 17.744     High  
cufflinks 6.748     High  
cufflinks 11.547     High  
cufflinks 6.138     High  
cufflinks 38.684     High High
cufflinks 11.835     High  
cufflinks 12.317     High  
cufflinks 3.859       Low
cufflinks 13.822     High  
cufflinks 8.74     High  
cufflinks 3.042       Low
cufflinks 11.517     High  
cufflinks 5.98        

0 Strain