Gene : Glyma.17G098600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11831//PTHR11831:SF13 - 30S 40S RIBOSOMAL PROTEIN Genomic Order:  986
Name:  ? Glyma.17G098600 Secondary Identifier:  ? PAC:30479031
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G098600 0.5kb upstream 0.5kb upstream 1927   true Chr17: 7779339-7781265 Glycine max
Glyma.17G098600 0.5kb upstream 0.5kb upstream 500   false Chr17: 7780766-7781265 Glycine max
Glyma.17G098600 0.5kb downstream 0.5kb downstream 1927   true Chr17: 7778839-7780765 Glycine max
Glyma.17G098600 0.5kb downstream 0.5kb downstream 500   false Chr17: 7778839-7779338 Glycine max
Glyma.17G098600 1.0kb upstream 1.0kb upstream 2427   true Chr17: 7779339-7781765 Glycine max
Glyma.17G098600 1.0kb upstream 1.0kb upstream 1000   false Chr17: 7780766-7781765 Glycine max
Glyma.17G098600 1.0kb downstream 1.0kb downstream 2427   true Chr17: 7778339-7780765 Glycine max
Glyma.17G098600 1.0kb downstream 1.0kb downstream 1000   false Chr17: 7778339-7779338 Glycine max
Glyma.17G098600 2.0kb upstream 2.0kb upstream 3427   true Chr17: 7779339-7782765 Glycine max
Glyma.17G098600 2.0kb upstream 2.0kb upstream 2000   false Chr17: 7780766-7782765 Glycine max
Glyma.17G098600 2.0kb downstream 2.0kb downstream 3427   true Chr17: 7777339-7780765 Glycine max
Glyma.17G098600 2.0kb downstream 2.0kb downstream 2000   false Chr17: 7777339-7779338 Glycine max
Glyma.17G098600 5.0kb upstream 5.0kb upstream 6427   true Chr17: 7779339-7785765 Glycine max
Glyma.17G098600 5.0kb upstream 5.0kb upstream 5000   false Chr17: 7780766-7785765 Glycine max
Glyma.17G098600 5.0kb downstream 5.0kb downstream 6427   true Chr17: 7774339-7780765 Glycine max
Glyma.17G098600 5.0kb downstream 5.0kb downstream 5000   false Chr17: 7774339-7779338 Glycine max
Glyma.17G098600 10.0kb upstream 10.0kb upstream 11427   true Chr17: 7779339-7790765 Glycine max
Glyma.17G098600 10.0kb upstream 10.0kb upstream 10000   false Chr17: 7780766-7790765 Glycine max
Glyma.17G098600 10.0kb downstream 10.0kb downstream 11427   true Chr17: 7769339-7780765 Glycine max
Glyma.17G098600 10.0kb downstream 10.0kb downstream 10000   false Chr17: 7769339-7779338 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301717 5265 Fabidae View MSA
124071399 5270 Rosid View MSA
123748066 5271 Pentapetalae View MSA
122790013 5272 Eudicot View MSA
122042868 5273 Angiosperm View MSA
121345250 5274 Embryophyte View MSA
123426931 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 86.0357 0.0 245.163 High  
cufflinks 122.945 0.0 366.754 High  
cufflinks 41.4971 0.0 111.353 High Low
cufflinks 71.1244 0.0 198.05 High  
cufflinks 201.709 0.0 663.952 High High
cufflinks 145.71 0.0 448.52 High  
cufflinks 244.138 0.0 834.215 High High
cufflinks 97.3136 0.0 281.865 High  
cufflinks 121.555 0.0 363.839 High  
cufflinks 66.223     High  
cufflinks 17.012     High Low
cufflinks 51.24     High  
cufflinks 197.849     High High
cufflinks 303.849     High High
cufflinks 17.489     High Low
cufflinks 61.92     High  
cufflinks 46.462     High  
cufflinks 51.905     High  
cufflinks 96.762     High  
cufflinks 41.582     High  
cufflinks 30.313     High  
cufflinks 45.713     High  
cufflinks 83.1     High  
cufflinks 22.232     High Low
cufflinks 51.583     High  
cufflinks 42.507     High  

0 Strain