Gene : Glyma.17G098900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23042:SF51 - TRANSCRIPTION FACTOR BHLH47 Genomic Order:  989
Name:  ? Glyma.17G098900 Secondary Identifier:  ? PAC:30482163
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G098900 0.5kb upstream 0.5kb upstream 2901   true Chr17: 7800159-7803059 Glycine max
Glyma.17G098900 0.5kb upstream 0.5kb upstream 500   false Chr17: 7802560-7803059 Glycine max
Glyma.17G098900 0.5kb downstream 0.5kb downstream 2901   true Chr17: 7799659-7802559 Glycine max
Glyma.17G098900 0.5kb downstream 0.5kb downstream 500   false Chr17: 7799659-7800158 Glycine max
Glyma.17G098900 1.0kb upstream 1.0kb upstream 3401   true Chr17: 7800159-7803559 Glycine max
Glyma.17G098900 1.0kb upstream 1.0kb upstream 1000   false Chr17: 7802560-7803559 Glycine max
Glyma.17G098900 1.0kb downstream 1.0kb downstream 3401   true Chr17: 7799159-7802559 Glycine max
Glyma.17G098900 1.0kb downstream 1.0kb downstream 1000   false Chr17: 7799159-7800158 Glycine max
Glyma.17G098900 2.0kb upstream 2.0kb upstream 4401   true Chr17: 7800159-7804559 Glycine max
Glyma.17G098900 2.0kb upstream 2.0kb upstream 2000   false Chr17: 7802560-7804559 Glycine max
Glyma.17G098900 2.0kb downstream 2.0kb downstream 4401   true Chr17: 7798159-7802559 Glycine max
Glyma.17G098900 2.0kb downstream 2.0kb downstream 2000   false Chr17: 7798159-7800158 Glycine max
Glyma.17G098900 5.0kb upstream 5.0kb upstream 7401   true Chr17: 7800159-7807559 Glycine max
Glyma.17G098900 5.0kb upstream 5.0kb upstream 5000   false Chr17: 7802560-7807559 Glycine max
Glyma.17G098900 5.0kb downstream 5.0kb downstream 7401   true Chr17: 7795159-7802559 Glycine max
Glyma.17G098900 5.0kb downstream 5.0kb downstream 5000   false Chr17: 7795159-7800158 Glycine max
Glyma.17G098900 10.0kb upstream 10.0kb upstream 12401   true Chr17: 7800159-7812559 Glycine max
Glyma.17G098900 10.0kb upstream 10.0kb upstream 10000   false Chr17: 7802560-7812559 Glycine max
Glyma.17G098900 10.0kb downstream 10.0kb downstream 12401   true Chr17: 7790159-7802559 Glycine max
Glyma.17G098900 10.0kb downstream 10.0kb downstream 10000   false Chr17: 7790159-7800158 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308621 5265 Fabidae View MSA
124071212 5270 Rosid View MSA
123743361 5271 Pentapetalae View MSA
122787264 5272 Eudicot View MSA
122043647 5273 Angiosperm View MSA
121351586 5274 Embryophyte View MSA
123427389 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.33329 0.0 27.8721    
cufflinks 7.17223 0.0 33.1809    
cufflinks 6.52504 0.0 27.6396    
cufflinks 5.64271 0.0 26.2021    
cufflinks 5.14214 0.0 24.2947   Low
cufflinks 7.66568 0.0 30.8769   High
cufflinks 6.91826 0.0 33.7291    
cufflinks 4.61781 0.0 22.0036   Low
cufflinks 5.69307 0.0 25.9712    
cufflinks 1.298        
cufflinks 1.626        
cufflinks 1.365        
cufflinks 1.007       Low
cufflinks 0.585       Low
cufflinks 1.369        
cufflinks 1.651        
cufflinks 1.96       High
cufflinks 1.387        
cufflinks 1.356        
cufflinks 1.522        
cufflinks 1.087        
cufflinks 1.834        
cufflinks 2.244       High
cufflinks 1.522        
cufflinks 1.693        
cufflinks 1.137        

0 Strain