Gene : Glyma.17G101300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11945:SF156 - MADS-BOX PROTEIN-RELATED Genomic Order:  1013
Name:  ? Glyma.17G101300 Secondary Identifier:  ? PAC:30478857
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G101300 0.5kb upstream 0.5kb upstream 5178   true Chr17: 7951272-7956449 Glycine max
Glyma.17G101300 0.5kb upstream 0.5kb upstream 500   false Chr17: 7951272-7951771 Glycine max
Glyma.17G101300 0.5kb downstream 0.5kb downstream 5178   true Chr17: 7951772-7956949 Glycine max
Glyma.17G101300 0.5kb downstream 0.5kb downstream 500   false Chr17: 7956450-7956949 Glycine max
Glyma.17G101300 1.0kb upstream 1.0kb upstream 5678   true Chr17: 7950772-7956449 Glycine max
Glyma.17G101300 1.0kb upstream 1.0kb upstream 1000   false Chr17: 7950772-7951771 Glycine max
Glyma.17G101300 1.0kb downstream 1.0kb downstream 5678   true Chr17: 7951772-7957449 Glycine max
Glyma.17G101300 1.0kb downstream 1.0kb downstream 1000   false Chr17: 7956450-7957449 Glycine max
Glyma.17G101300 2.0kb upstream 2.0kb upstream 6678   true Chr17: 7949772-7956449 Glycine max
Glyma.17G101300 2.0kb upstream 2.0kb upstream 2000   false Chr17: 7949772-7951771 Glycine max
Glyma.17G101300 2.0kb downstream 2.0kb downstream 6678   true Chr17: 7951772-7958449 Glycine max
Glyma.17G101300 2.0kb downstream 2.0kb downstream 2000   false Chr17: 7956450-7958449 Glycine max
Glyma.17G101300 5.0kb upstream 5.0kb upstream 9678   true Chr17: 7946772-7956449 Glycine max
Glyma.17G101300 5.0kb upstream 5.0kb upstream 5000   false Chr17: 7946772-7951771 Glycine max
Glyma.17G101300 5.0kb downstream 5.0kb downstream 9678   true Chr17: 7951772-7961449 Glycine max
Glyma.17G101300 5.0kb downstream 5.0kb downstream 5000   false Chr17: 7956450-7961449 Glycine max
Glyma.17G101300 10.0kb upstream 10.0kb upstream 14678   true Chr17: 7941772-7956449 Glycine max
Glyma.17G101300 10.0kb upstream 10.0kb upstream 10000   false Chr17: 7941772-7951771 Glycine max
Glyma.17G101300 10.0kb downstream 10.0kb downstream 14678   true Chr17: 7951772-7966449 Glycine max
Glyma.17G101300 10.0kb downstream 10.0kb downstream 10000   false Chr17: 7956450-7966449 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312071 5265 Fabidae View MSA
124062317 5270 Rosid View MSA
123742642 5271 Pentapetalae View MSA
122791202 5272 Eudicot View MSA
122050633 5273 Angiosperm View MSA
121350455 5274 Embryophyte View MSA
123427239 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.53457 0.0 11.7031   High
cufflinks 0.0389121 0.0 0.161656 Low Low
cufflinks 0.507382 0.0 2.46115    
cufflinks 0.289246 0.0 1.40989    
cufflinks 0.0834579 0.0 0.334974 Low  
cufflinks 0.129121 0.0 0.509589 Low  
cufflinks 2.42019 0.0 11.3487   High
cufflinks 0.0261099 0.0 0.115183 Low Low
cufflinks 0.0948863 0.0 0.378325 Low  
cufflinks 0.013     Low  
cufflinks 0.002     Low Low
cufflinks 0.064     Low  
cufflinks 0.002     Low Low
cufflinks 0.009     Low  
cufflinks 0.645       High
cufflinks 0.263        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.403        
cufflinks 0.016     Low  
cufflinks 0.494        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.568       High
cufflinks 0.599       High
cufflinks 0.002     Low Low
cufflinks 0.446        
cufflinks 0.007     Low  

0 Strain