Gene : Glyma.17G102400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31311:SF4 - GLYCOSYLTRANSFERASE 3-RELATED Genomic Order:  1024
Name:  ? Glyma.17G102400 Secondary Identifier:  ? PAC:30479218
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5936 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G102400 0.5kb upstream 0.5kb upstream 2728   true Chr17: 8026982-8029709 Glycine max
Glyma.17G102400 0.5kb upstream 0.5kb upstream 500   false Chr17: 8026982-8027481 Glycine max
Glyma.17G102400 0.5kb downstream 0.5kb downstream 2728   true Chr17: 8027482-8030209 Glycine max
Glyma.17G102400 0.5kb downstream 0.5kb downstream 500   false Chr17: 8029710-8030209 Glycine max
Glyma.17G102400 1.0kb upstream 1.0kb upstream 3228   true Chr17: 8026482-8029709 Glycine max
Glyma.17G102400 1.0kb upstream 1.0kb upstream 1000   false Chr17: 8026482-8027481 Glycine max
Glyma.17G102400 1.0kb downstream 1.0kb downstream 3228   true Chr17: 8027482-8030709 Glycine max
Glyma.17G102400 1.0kb downstream 1.0kb downstream 1000   false Chr17: 8029710-8030709 Glycine max
Glyma.17G102400 2.0kb upstream 2.0kb upstream 4228   true Chr17: 8025482-8029709 Glycine max
Glyma.17G102400 2.0kb upstream 2.0kb upstream 2000   false Chr17: 8025482-8027481 Glycine max
Glyma.17G102400 2.0kb downstream 2.0kb downstream 4228   true Chr17: 8027482-8031709 Glycine max
Glyma.17G102400 2.0kb downstream 2.0kb downstream 2000   false Chr17: 8029710-8031709 Glycine max
Glyma.17G102400 5.0kb upstream 5.0kb upstream 7228   true Chr17: 8022482-8029709 Glycine max
Glyma.17G102400 5.0kb upstream 5.0kb upstream 5000   false Chr17: 8022482-8027481 Glycine max
Glyma.17G102400 5.0kb downstream 5.0kb downstream 7228   true Chr17: 8027482-8034709 Glycine max
Glyma.17G102400 5.0kb downstream 5.0kb downstream 5000   false Chr17: 8029710-8034709 Glycine max
Glyma.17G102400 10.0kb upstream 10.0kb upstream 12228   true Chr17: 8017482-8029709 Glycine max
Glyma.17G102400 10.0kb upstream 10.0kb upstream 10000   false Chr17: 8017482-8027481 Glycine max
Glyma.17G102400 10.0kb downstream 10.0kb downstream 12228   true Chr17: 8027482-8039709 Glycine max
Glyma.17G102400 10.0kb downstream 10.0kb downstream 10000   false Chr17: 8029710-8039709 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311174 5265 Fabidae View MSA
124066918 5270 Rosid View MSA
123741049 5271 Pentapetalae View MSA
122787674 5272 Eudicot View MSA
122047290 5273 Angiosperm View MSA
121349054 5274 Embryophyte View MSA
123428220 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.6127 0.0 33.7154    
cufflinks 9.17736 0.0 24.8271   Low
cufflinks 10.8096 0.0 29.0393    
cufflinks 14.1267 0.0 37.7056    
cufflinks 19.6571 0.0 52.6365    
cufflinks 30.5786 0.0 83.7951 High High
cufflinks 9.1092 0.0 24.6494   Low
cufflinks 20.5274 0.0 55.0067    
cufflinks 11.5158 0.0 30.8396    
cufflinks 63.377     High High
cufflinks 16.879     High  
cufflinks 17.703     High  
cufflinks 27.695     High  
cufflinks 21.982     High  
cufflinks 17.768     High  
cufflinks 13.842     High  
cufflinks 109.106     High High
cufflinks 39.276     High High
cufflinks 10.35     High  
cufflinks 9.809     High  
cufflinks 10.927     High  
cufflinks 10.116     High  
cufflinks 11.75     High  
cufflinks 12.516     High  
cufflinks 8.962     High Low
cufflinks 21.615     High  

0 Strain