Gene : Glyma.17G103300 G. max Wm82.a2.v1
Defline:  (1 of 32) PF05701 - Weak chloroplast movement under blue light (WEMBL) Genomic Order:  1033
Name:  ? Glyma.17G103300 Secondary Identifier:  ? PAC:30481673
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G103300 0.5kb upstream 0.5kb upstream 2907   true Chr17: 8101848-8104754 Glycine max
Glyma.17G103300 0.5kb upstream 0.5kb upstream 500   false Chr17: 8101848-8102347 Glycine max
Glyma.17G103300 0.5kb downstream 0.5kb downstream 2907   true Chr17: 8102348-8105254 Glycine max
Glyma.17G103300 0.5kb downstream 0.5kb downstream 500   false Chr17: 8104755-8105254 Glycine max
Glyma.17G103300 1.0kb upstream 1.0kb upstream 3407   true Chr17: 8101348-8104754 Glycine max
Glyma.17G103300 1.0kb upstream 1.0kb upstream 1000   false Chr17: 8101348-8102347 Glycine max
Glyma.17G103300 1.0kb downstream 1.0kb downstream 3407   true Chr17: 8102348-8105754 Glycine max
Glyma.17G103300 1.0kb downstream 1.0kb downstream 1000   false Chr17: 8104755-8105754 Glycine max
Glyma.17G103300 2.0kb upstream 2.0kb upstream 4407   true Chr17: 8100348-8104754 Glycine max
Glyma.17G103300 2.0kb upstream 2.0kb upstream 2000   false Chr17: 8100348-8102347 Glycine max
Glyma.17G103300 2.0kb downstream 2.0kb downstream 4407   true Chr17: 8102348-8106754 Glycine max
Glyma.17G103300 2.0kb downstream 2.0kb downstream 2000   false Chr17: 8104755-8106754 Glycine max
Glyma.17G103300 5.0kb upstream 5.0kb upstream 7407   true Chr17: 8097348-8104754 Glycine max
Glyma.17G103300 5.0kb upstream 5.0kb upstream 5000   false Chr17: 8097348-8102347 Glycine max
Glyma.17G103300 5.0kb downstream 5.0kb downstream 7407   true Chr17: 8102348-8109754 Glycine max
Glyma.17G103300 5.0kb downstream 5.0kb downstream 5000   false Chr17: 8104755-8109754 Glycine max
Glyma.17G103300 10.0kb upstream 10.0kb upstream 12407   true Chr17: 8092348-8104754 Glycine max
Glyma.17G103300 10.0kb upstream 10.0kb upstream 10000   false Chr17: 8092348-8102347 Glycine max
Glyma.17G103300 10.0kb downstream 10.0kb downstream 12407   true Chr17: 8102348-8114754 Glycine max
Glyma.17G103300 10.0kb downstream 10.0kb downstream 10000   false Chr17: 8104755-8114754 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310048 5265 Fabidae View MSA
124070466 5270 Rosid View MSA
123750425 5271 Pentapetalae View MSA
122795131 5272 Eudicot View MSA
122048525 5273 Angiosperm View MSA
121311004 5274 Embryophyte View MSA
123348362 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0194916 0.0 0.0830631 Low  
cufflinks 0.00934927 0.0 0.0423991 Low  
cufflinks 0.0176823 0.0 0.0756561 Low  
cufflinks 0.0102524 0.0 0.046005 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.982267 0.0 3.41778   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.008     Low  
cufflinks 0.007     Low  
cufflinks 0.013     Low  
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.167       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.006     Low  
cufflinks 0.153       High
cufflinks 0.007     Low  
cufflinks 0.125        
cufflinks 0.416       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.174       High
cufflinks 0.0     Not Expressed Not Expressed

0 Strain