Gene : Glyma.17G091600 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 Genomic Order:  916
Name:  ? Glyma.17G091600 Secondary Identifier:  ? PAC:30479913
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G091600 0.5kb upstream 0.5kb upstream 2549   true Chr17: 7129704-7132252 Glycine max
Glyma.17G091600 0.5kb upstream 0.5kb upstream 500   false Chr17: 7131753-7132252 Glycine max
Glyma.17G091600 0.5kb downstream 0.5kb downstream 2549   true Chr17: 7129204-7131752 Glycine max
Glyma.17G091600 0.5kb downstream 0.5kb downstream 500   false Chr17: 7129204-7129703 Glycine max
Glyma.17G091600 1.0kb upstream 1.0kb upstream 3049   true Chr17: 7129704-7132752 Glycine max
Glyma.17G091600 1.0kb upstream 1.0kb upstream 1000   false Chr17: 7131753-7132752 Glycine max
Glyma.17G091600 1.0kb downstream 1.0kb downstream 3049   true Chr17: 7128704-7131752 Glycine max
Glyma.17G091600 1.0kb downstream 1.0kb downstream 1000   false Chr17: 7128704-7129703 Glycine max
Glyma.17G091600 2.0kb upstream 2.0kb upstream 4049   true Chr17: 7129704-7133752 Glycine max
Glyma.17G091600 2.0kb upstream 2.0kb upstream 2000   false Chr17: 7131753-7133752 Glycine max
Glyma.17G091600 2.0kb downstream 2.0kb downstream 4049   true Chr17: 7127704-7131752 Glycine max
Glyma.17G091600 2.0kb downstream 2.0kb downstream 2000   false Chr17: 7127704-7129703 Glycine max
Glyma.17G091600 5.0kb upstream 5.0kb upstream 7049   true Chr17: 7129704-7136752 Glycine max
Glyma.17G091600 5.0kb upstream 5.0kb upstream 5000   false Chr17: 7131753-7136752 Glycine max
Glyma.17G091600 5.0kb downstream 5.0kb downstream 7049   true Chr17: 7124704-7131752 Glycine max
Glyma.17G091600 5.0kb downstream 5.0kb downstream 5000   false Chr17: 7124704-7129703 Glycine max
Glyma.17G091600 10.0kb upstream 10.0kb upstream 12049   true Chr17: 7129704-7141752 Glycine max
Glyma.17G091600 10.0kb upstream 10.0kb upstream 10000   false Chr17: 7131753-7141752 Glycine max
Glyma.17G091600 10.0kb downstream 10.0kb downstream 12049   true Chr17: 7119704-7131752 Glycine max
Glyma.17G091600 10.0kb downstream 10.0kb downstream 10000   false Chr17: 7119704-7129703 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041020 5273 Angiosperm View MSA
122316128 5265 Fabidae View MSA
124071790 5270 Rosid View MSA
123752396 5271 Pentapetalae View MSA
122790664 5272 Eudicot View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.775521 0.0 2.79347    
cufflinks 2.06541 0.0 6.74703    
cufflinks 0.217318 0.0 0.832998   Low
cufflinks 2.7413 0.0 8.59929    
cufflinks 1.13119 0.0 3.96203    
cufflinks 0.297194 0.0 1.12552   Low
cufflinks 1.29957 0.0 4.49711    
cufflinks 12.525 0.0 33.6117   High
cufflinks 1.63768 0.0 5.51067    
cufflinks 2.668       High
cufflinks 0.009     Low Low
cufflinks 0.581        
cufflinks 0.216        
cufflinks 0.035     Low Low
cufflinks 0.018     Low Low
cufflinks 0.838        
cufflinks 0.093        
cufflinks 0.428        
cufflinks 1.512       High
cufflinks 0.612        
cufflinks 0.038     Low Low
cufflinks 0.924        
cufflinks 1.314       High
cufflinks 0.142        
cufflinks 0.629        
cufflinks 0.051     Low  

0 Strain