Gene : Glyma.17G092600 G. max Wm82.a2.v1
Defline:  (1 of 18) KOG1700 - Regulatory protein MLP and related LIM proteins Genomic Order:  926
Name:  ? Glyma.17G092600 Secondary Identifier:  ? PAC:30482018
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G092600 0.5kb upstream 0.5kb upstream 4961   true Chr17: 7220742-7225702 Glycine max
Glyma.17G092600 0.5kb upstream 0.5kb upstream 500   false Chr17: 7225203-7225702 Glycine max
Glyma.17G092600 0.5kb downstream 0.5kb downstream 4961   true Chr17: 7220242-7225202 Glycine max
Glyma.17G092600 0.5kb downstream 0.5kb downstream 500   false Chr17: 7220242-7220741 Glycine max
Glyma.17G092600 1.0kb upstream 1.0kb upstream 5461   true Chr17: 7220742-7226202 Glycine max
Glyma.17G092600 1.0kb upstream 1.0kb upstream 1000   false Chr17: 7225203-7226202 Glycine max
Glyma.17G092600 1.0kb downstream 1.0kb downstream 5461   true Chr17: 7219742-7225202 Glycine max
Glyma.17G092600 1.0kb downstream 1.0kb downstream 1000   false Chr17: 7219742-7220741 Glycine max
Glyma.17G092600 2.0kb upstream 2.0kb upstream 6461   true Chr17: 7220742-7227202 Glycine max
Glyma.17G092600 2.0kb upstream 2.0kb upstream 2000   false Chr17: 7225203-7227202 Glycine max
Glyma.17G092600 2.0kb downstream 2.0kb downstream 6461   true Chr17: 7218742-7225202 Glycine max
Glyma.17G092600 2.0kb downstream 2.0kb downstream 2000   false Chr17: 7218742-7220741 Glycine max
Glyma.17G092600 5.0kb upstream 5.0kb upstream 9461   true Chr17: 7220742-7230202 Glycine max
Glyma.17G092600 5.0kb upstream 5.0kb upstream 5000   false Chr17: 7225203-7230202 Glycine max
Glyma.17G092600 5.0kb downstream 5.0kb downstream 9461   true Chr17: 7215742-7225202 Glycine max
Glyma.17G092600 5.0kb downstream 5.0kb downstream 5000   false Chr17: 7215742-7220741 Glycine max
Glyma.17G092600 10.0kb upstream 10.0kb upstream 14461   true Chr17: 7220742-7235202 Glycine max
Glyma.17G092600 10.0kb upstream 10.0kb upstream 10000   false Chr17: 7225203-7235202 Glycine max
Glyma.17G092600 10.0kb downstream 10.0kb downstream 14461   true Chr17: 7210742-7225202 Glycine max
Glyma.17G092600 10.0kb downstream 10.0kb downstream 10000   false Chr17: 7210742-7220741 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311291 5265 Fabidae View MSA
124069732 5270 Rosid View MSA
123745629 5271 Pentapetalae View MSA
122793915 5272 Eudicot View MSA
122049992 5273 Angiosperm View MSA
121348284 5274 Embryophyte View MSA
123426269 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.439981 0.0 1.67002    
cufflinks 0.826477 0.0 3.04282    
cufflinks 0.22306 0.0 0.870578    
cufflinks 0.37632 0.0 1.4367    
cufflinks 3.25661 0.0 10.6418   High
cufflinks 3.49864 0.0 11.3103   High
cufflinks 0.0836917 0.0 0.339488 Low Low
cufflinks 1.85624 0.0 6.4514    
cufflinks 2.08629 0.0 7.18123    
cufflinks 2.258       High
cufflinks 0.606        
cufflinks 0.238        
cufflinks 1.516       High
cufflinks 2.122       High
cufflinks 1.794       High
cufflinks 0.145       Low
cufflinks 0.489        
cufflinks 0.23        
cufflinks 0.285        
cufflinks 0.155       Low
cufflinks 1.047        
cufflinks 0.189        
cufflinks 0.16       Low
cufflinks 0.306        
cufflinks 0.187        
cufflinks 1.297        

0 Strain