Gene : Glyma.17G097000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10264:SF92 - HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 1 Genomic Order:  970
Name:  ? Glyma.17G097000 Secondary Identifier:  ? PAC:30479707
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G097000 0.5kb upstream 0.5kb upstream 4167   true Chr17: 7646982-7651148 Glycine max
Glyma.17G097000 0.5kb upstream 0.5kb upstream 500   false Chr17: 7646982-7647481 Glycine max
Glyma.17G097000 0.5kb downstream 0.5kb downstream 4167   true Chr17: 7647482-7651648 Glycine max
Glyma.17G097000 0.5kb downstream 0.5kb downstream 500   false Chr17: 7651149-7651648 Glycine max
Glyma.17G097000 1.0kb upstream 1.0kb upstream 4667   true Chr17: 7646482-7651148 Glycine max
Glyma.17G097000 1.0kb upstream 1.0kb upstream 1000   false Chr17: 7646482-7647481 Glycine max
Glyma.17G097000 1.0kb downstream 1.0kb downstream 4667   true Chr17: 7647482-7652148 Glycine max
Glyma.17G097000 1.0kb downstream 1.0kb downstream 1000   false Chr17: 7651149-7652148 Glycine max
Glyma.17G097000 2.0kb upstream 2.0kb upstream 5667   true Chr17: 7645482-7651148 Glycine max
Glyma.17G097000 2.0kb upstream 2.0kb upstream 2000   false Chr17: 7645482-7647481 Glycine max
Glyma.17G097000 2.0kb downstream 2.0kb downstream 5667   true Chr17: 7647482-7653148 Glycine max
Glyma.17G097000 2.0kb downstream 2.0kb downstream 2000   false Chr17: 7651149-7653148 Glycine max
Glyma.17G097000 5.0kb upstream 5.0kb upstream 8667   true Chr17: 7642482-7651148 Glycine max
Glyma.17G097000 5.0kb upstream 5.0kb upstream 5000   false Chr17: 7642482-7647481 Glycine max
Glyma.17G097000 5.0kb downstream 5.0kb downstream 8667   true Chr17: 7647482-7656148 Glycine max
Glyma.17G097000 5.0kb downstream 5.0kb downstream 5000   false Chr17: 7651149-7656148 Glycine max
Glyma.17G097000 10.0kb upstream 10.0kb upstream 13667   true Chr17: 7637482-7651148 Glycine max
Glyma.17G097000 10.0kb upstream 10.0kb upstream 10000   false Chr17: 7637482-7647481 Glycine max
Glyma.17G097000 10.0kb downstream 10.0kb downstream 13667   true Chr17: 7647482-7661148 Glycine max
Glyma.17G097000 10.0kb downstream 10.0kb downstream 10000   false Chr17: 7651149-7661148 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312030 5265 Fabidae View MSA
124068988 5270 Rosid View MSA
123744628 5271 Pentapetalae View MSA
122796204 5272 Eudicot View MSA
122042629 5273 Angiosperm View MSA
121344543 5274 Embryophyte View MSA
123427890 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.9416 0.0 78.1861    
cufflinks 6.43337 0.0 25.113   Low
cufflinks 16.9486 0.0 63.1974    
cufflinks 6.9291 0.0 26.4949   Low
cufflinks 12.7874 0.0 49.6229    
cufflinks 49.6098 0.0 209.558 High High
cufflinks 13.2101 0.0 53.2482    
cufflinks 9.02127 0.0 33.6715    
cufflinks 14.4917 0.0 55.8706    
cufflinks 0.875        
cufflinks 11.234     High High
cufflinks 1.646        
cufflinks 2.021        
cufflinks 0.988        
cufflinks 4.725        
cufflinks 1.332        
cufflinks 1.352        
cufflinks 0.901        
cufflinks 1.16        
cufflinks 1.146        
cufflinks 7.382     High High
cufflinks 1.85        
cufflinks 1.071        
cufflinks 11.502     High High
cufflinks 1.018        
cufflinks 4.705        

0 Strain