Gene : Glyma.17G097400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11527//PTHR11527:SF121 - SMALL HEAT-SHOCK PROTEIN HSP20 FAMILY Genomic Order:  974
Name:  ? Glyma.17G097400 Secondary Identifier:  ? PAC:30482059
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G097400 0.5kb upstream 0.5kb upstream 1850   true Chr17: 7664108-7665957 Glycine max
Glyma.17G097400 0.5kb upstream 0.5kb upstream 500   false Chr17: 7665458-7665957 Glycine max
Glyma.17G097400 0.5kb downstream 0.5kb downstream 1850   true Chr17: 7663608-7665457 Glycine max
Glyma.17G097400 0.5kb downstream 0.5kb downstream 500   false Chr17: 7663608-7664107 Glycine max
Glyma.17G097400 1.0kb upstream 1.0kb upstream 2350   true Chr17: 7664108-7666457 Glycine max
Glyma.17G097400 1.0kb upstream 1.0kb upstream 1000   false Chr17: 7665458-7666457 Glycine max
Glyma.17G097400 1.0kb downstream 1.0kb downstream 2350   true Chr17: 7663108-7665457 Glycine max
Glyma.17G097400 1.0kb downstream 1.0kb downstream 1000   false Chr17: 7663108-7664107 Glycine max
Glyma.17G097400 2.0kb upstream 2.0kb upstream 3350   true Chr17: 7664108-7667457 Glycine max
Glyma.17G097400 2.0kb upstream 2.0kb upstream 2000   false Chr17: 7665458-7667457 Glycine max
Glyma.17G097400 2.0kb downstream 2.0kb downstream 3350   true Chr17: 7662108-7665457 Glycine max
Glyma.17G097400 2.0kb downstream 2.0kb downstream 2000   false Chr17: 7662108-7664107 Glycine max
Glyma.17G097400 5.0kb upstream 5.0kb upstream 6350   true Chr17: 7664108-7670457 Glycine max
Glyma.17G097400 5.0kb upstream 5.0kb upstream 5000   false Chr17: 7665458-7670457 Glycine max
Glyma.17G097400 5.0kb downstream 5.0kb downstream 6350   true Chr17: 7659108-7665457 Glycine max
Glyma.17G097400 5.0kb downstream 5.0kb downstream 5000   false Chr17: 7659108-7664107 Glycine max
Glyma.17G097400 10.0kb upstream 10.0kb upstream 11350   true Chr17: 7664108-7675457 Glycine max
Glyma.17G097400 10.0kb upstream 10.0kb upstream 10000   false Chr17: 7665458-7675457 Glycine max
Glyma.17G097400 10.0kb downstream 10.0kb downstream 11350   true Chr17: 7654108-7665457 Glycine max
Glyma.17G097400 10.0kb downstream 10.0kb downstream 10000   false Chr17: 7654108-7664107 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309456 5265 Fabidae View MSA
124069899 5270 Rosid View MSA
123751884 5271 Pentapetalae View MSA
122795343 5272 Eudicot View MSA
122051065 5273 Angiosperm View MSA
121312276 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.595963 0.0 3.22266   High
cufflinks 0.162833 0.0 1.63266 Low  
cufflinks 0.444807 0.0 2.01918    
cufflinks 0.199365 0.0 1.17506    
cufflinks 0.29412 0.0 1.69988    
cufflinks 0.266458 0.0 1.32208 Low  
cufflinks 0.165924 0.0 0.943463 Low  
cufflinks 0.138114 0.0 0.97653 Low Low
cufflinks 0.830176 0.0 3.67164   High
cufflinks 0.548        
cufflinks 0.559        
cufflinks 0.39        
cufflinks 1.123       High
cufflinks 0.36        
cufflinks 0.096       Low
cufflinks 0.182        
cufflinks 0.347        
cufflinks 0.69        
cufflinks 0.023     Low Low
cufflinks 0.386        
cufflinks 0.521        
cufflinks 0.391        
cufflinks 0.16        
cufflinks 0.381        
cufflinks 0.206        
cufflinks 0.478        

0 Strain