Gene : Glyma.17G085400 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11721 - 60S RIBOSOMAL PROTEIN L27A Genomic Order:  854
Name:  ? Glyma.17G085400 Secondary Identifier:  ? PAC:30482316
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G085400 0.5kb upstream 0.5kb upstream 1825   true Chr17: 6582681-6584505 Glycine max
Glyma.17G085400 0.5kb upstream 0.5kb upstream 500   false Chr17: 6582681-6583180 Glycine max
Glyma.17G085400 0.5kb downstream 0.5kb downstream 1825   true Chr17: 6583181-6585005 Glycine max
Glyma.17G085400 0.5kb downstream 0.5kb downstream 500   false Chr17: 6584506-6585005 Glycine max
Glyma.17G085400 1.0kb upstream 1.0kb upstream 2325   true Chr17: 6582181-6584505 Glycine max
Glyma.17G085400 1.0kb upstream 1.0kb upstream 1000   false Chr17: 6582181-6583180 Glycine max
Glyma.17G085400 1.0kb downstream 1.0kb downstream 2325   true Chr17: 6583181-6585505 Glycine max
Glyma.17G085400 1.0kb downstream 1.0kb downstream 1000   false Chr17: 6584506-6585505 Glycine max
Glyma.17G085400 2.0kb upstream 2.0kb upstream 3325   true Chr17: 6581181-6584505 Glycine max
Glyma.17G085400 2.0kb upstream 2.0kb upstream 2000   false Chr17: 6581181-6583180 Glycine max
Glyma.17G085400 2.0kb downstream 2.0kb downstream 3325   true Chr17: 6583181-6586505 Glycine max
Glyma.17G085400 2.0kb downstream 2.0kb downstream 2000   false Chr17: 6584506-6586505 Glycine max
Glyma.17G085400 5.0kb upstream 5.0kb upstream 6325   true Chr17: 6578181-6584505 Glycine max
Glyma.17G085400 5.0kb upstream 5.0kb upstream 5000   false Chr17: 6578181-6583180 Glycine max
Glyma.17G085400 5.0kb downstream 5.0kb downstream 6325   true Chr17: 6583181-6589505 Glycine max
Glyma.17G085400 5.0kb downstream 5.0kb downstream 5000   false Chr17: 6584506-6589505 Glycine max
Glyma.17G085400 10.0kb upstream 10.0kb upstream 11325   true Chr17: 6573181-6584505 Glycine max
Glyma.17G085400 10.0kb upstream 10.0kb upstream 10000   false Chr17: 6573181-6583180 Glycine max
Glyma.17G085400 10.0kb downstream 10.0kb downstream 11325   true Chr17: 6583181-6594505 Glycine max
Glyma.17G085400 10.0kb downstream 10.0kb downstream 10000   false Chr17: 6584506-6594505 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313836 5265 Fabidae View MSA
124061356 5270 Rosid View MSA
123746209 5271 Pentapetalae View MSA
122794134 5272 Eudicot View MSA
122049114 5273 Angiosperm View MSA
121346652 5274 Embryophyte View MSA
123426087 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 103.591 0.0 402.784 High  
cufflinks 129.106 0.0 534.354 High  
cufflinks 68.0834 0.0 245.073 High Low
cufflinks 78.95 0.0 291.603 High Low
cufflinks 192.016 0.0 792.848 High High
cufflinks 128.078 0.0 531.861 High  
cufflinks 177.018 0.0 701.413 High High
cufflinks 134.36 0.0 561.749 High  
cufflinks 127.543 0.0 529.694 High  
cufflinks 39.353     High  
cufflinks 9.374     High Low
cufflinks 33.445     High  
cufflinks 67.074     High High
cufflinks 97.072     High High
cufflinks 11.429     High Low
cufflinks 33.84     High  
cufflinks 25.103     High  
cufflinks 34.847     High  
cufflinks 45.484     High  
cufflinks 22.595     High  
cufflinks 15.19     High Low
cufflinks 25.592     High  
cufflinks 34.253     High  
cufflinks 16.224     High  
cufflinks 26.105     High  
cufflinks 23.102     High  

0 Strain