Gene : Glyma.17G086500 G. max Wm82.a2.v1
Defline:  (1 of 6) 2.6.1.27 - Tryptophan transaminase / Tryptophan aminotransferase Genomic Order:  865
Name:  ? Glyma.17G086500 Secondary Identifier:  ? PAC:30482324
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWYDQC-4 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G086500 0.5kb upstream 0.5kb upstream 7458   true Chr17: 6672514-6679971 Glycine max
Glyma.17G086500 0.5kb upstream 0.5kb upstream 500   false Chr17: 6679472-6679971 Glycine max
Glyma.17G086500 0.5kb downstream 0.5kb downstream 7458   true Chr17: 6672014-6679471 Glycine max
Glyma.17G086500 0.5kb downstream 0.5kb downstream 500   false Chr17: 6672014-6672513 Glycine max
Glyma.17G086500 1.0kb upstream 1.0kb upstream 7958   true Chr17: 6672514-6680471 Glycine max
Glyma.17G086500 1.0kb upstream 1.0kb upstream 1000   false Chr17: 6679472-6680471 Glycine max
Glyma.17G086500 1.0kb downstream 1.0kb downstream 7958   true Chr17: 6671514-6679471 Glycine max
Glyma.17G086500 1.0kb downstream 1.0kb downstream 1000   false Chr17: 6671514-6672513 Glycine max
Glyma.17G086500 2.0kb upstream 2.0kb upstream 8958   true Chr17: 6672514-6681471 Glycine max
Glyma.17G086500 2.0kb upstream 2.0kb upstream 2000   false Chr17: 6679472-6681471 Glycine max
Glyma.17G086500 2.0kb downstream 2.0kb downstream 8958   true Chr17: 6670514-6679471 Glycine max
Glyma.17G086500 2.0kb downstream 2.0kb downstream 2000   false Chr17: 6670514-6672513 Glycine max
Glyma.17G086500 5.0kb upstream 5.0kb upstream 11958   true Chr17: 6672514-6684471 Glycine max
Glyma.17G086500 5.0kb upstream 5.0kb upstream 5000   false Chr17: 6679472-6684471 Glycine max
Glyma.17G086500 5.0kb downstream 5.0kb downstream 11958   true Chr17: 6667514-6679471 Glycine max
Glyma.17G086500 5.0kb downstream 5.0kb downstream 5000   false Chr17: 6667514-6672513 Glycine max
Glyma.17G086500 10.0kb upstream 10.0kb upstream 16958   true Chr17: 6672514-6689471 Glycine max
Glyma.17G086500 10.0kb upstream 10.0kb upstream 10000   false Chr17: 6679472-6689471 Glycine max
Glyma.17G086500 10.0kb downstream 10.0kb downstream 16958   true Chr17: 6662514-6679471 Glycine max
Glyma.17G086500 10.0kb downstream 10.0kb downstream 10000   false Chr17: 6662514-6672513 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311428 5265 Fabidae View MSA
124065149 5270 Rosid View MSA
123746345 5271 Pentapetalae View MSA
122790946 5272 Eudicot View MSA
122048062 5273 Angiosperm View MSA
121350160 5274 Embryophyte View MSA
123381598 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.83574 0.0 9.06221    
cufflinks 0.662501 0.0 4.12502    
cufflinks 0.008131 0.0 0.0475091 Low Low
cufflinks 0.137547 0.0 0.992178 Low  
cufflinks 2.63683 0.0 11.4254    
cufflinks 0.790892 0.0 4.56988    
cufflinks 2.0037 0.0 7.19376    
cufflinks 0.355643 0.0 2.31852    
cufflinks 0.8035 0.0 4.71588    
cufflinks 0.139        
cufflinks 0.003     Low Low
cufflinks 0.018     Low  
cufflinks 0.288       High
cufflinks 0.338       High
cufflinks 0.007     Low  
cufflinks 0.189        
cufflinks 0.007     Low  
cufflinks 0.106     Low  
cufflinks 0.037     Low  
cufflinks 0.061     Low  
cufflinks 0.01     Low  
cufflinks 0.169        
cufflinks 0.1     Low  
cufflinks 0.001     Low Low
cufflinks 0.136        
cufflinks 0.016     Low  

0 Strain