Gene : Glyma.17G089300 G. max Wm82.a2.v1
Defline:  (1 of 79) PF02701 - Dof domain, zinc finger (zf-Dof) Genomic Order:  893
Name:  ? Glyma.17G089300 Secondary Identifier:  ? PAC:30480480
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G089300 0.5kb upstream 0.5kb upstream 3190   true Chr17: 6939203-6942392 Glycine max
Glyma.17G089300 0.5kb upstream 0.5kb upstream 500   false Chr17: 6941893-6942392 Glycine max
Glyma.17G089300 0.5kb downstream 0.5kb downstream 3190   true Chr17: 6938703-6941892 Glycine max
Glyma.17G089300 0.5kb downstream 0.5kb downstream 500   false Chr17: 6938703-6939202 Glycine max
Glyma.17G089300 1.0kb upstream 1.0kb upstream 3690   true Chr17: 6939203-6942892 Glycine max
Glyma.17G089300 1.0kb upstream 1.0kb upstream 1000   false Chr17: 6941893-6942892 Glycine max
Glyma.17G089300 1.0kb downstream 1.0kb downstream 3690   true Chr17: 6938203-6941892 Glycine max
Glyma.17G089300 1.0kb downstream 1.0kb downstream 1000   false Chr17: 6938203-6939202 Glycine max
Glyma.17G089300 2.0kb upstream 2.0kb upstream 4690   true Chr17: 6939203-6943892 Glycine max
Glyma.17G089300 2.0kb upstream 2.0kb upstream 2000   false Chr17: 6941893-6943892 Glycine max
Glyma.17G089300 2.0kb downstream 2.0kb downstream 4690   true Chr17: 6937203-6941892 Glycine max
Glyma.17G089300 2.0kb downstream 2.0kb downstream 2000   false Chr17: 6937203-6939202 Glycine max
Glyma.17G089300 5.0kb upstream 5.0kb upstream 7690   true Chr17: 6939203-6946892 Glycine max
Glyma.17G089300 5.0kb upstream 5.0kb upstream 5000   false Chr17: 6941893-6946892 Glycine max
Glyma.17G089300 5.0kb downstream 5.0kb downstream 7690   true Chr17: 6934203-6941892 Glycine max
Glyma.17G089300 5.0kb downstream 5.0kb downstream 5000   false Chr17: 6934203-6939202 Glycine max
Glyma.17G089300 10.0kb upstream 10.0kb upstream 12690   true Chr17: 6939203-6951892 Glycine max
Glyma.17G089300 10.0kb upstream 10.0kb upstream 10000   false Chr17: 6941893-6951892 Glycine max
Glyma.17G089300 10.0kb downstream 10.0kb downstream 12690   true Chr17: 6929203-6941892 Glycine max
Glyma.17G089300 10.0kb downstream 10.0kb downstream 10000   false Chr17: 6929203-6939202 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253871 5265 Fabidae View MSA
124068881 5270 Rosid View MSA
123743079 5271 Pentapetalae View MSA
122797723 5272 Eudicot View MSA
122049615 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0866433 0.0 0.346861 Low Low
cufflinks 1.55713 0.0 5.36542    
cufflinks 0.321828 0.0 1.22054    
cufflinks 0.544275 0.0 2.01679    
cufflinks 0.801858 0.0 2.91304    
cufflinks 0.321193 0.0 1.22067    
cufflinks 1.53568 0.0 5.30153    
cufflinks 1.39473 0.0 4.84739    
cufflinks 0.848693 0.0 3.06704    
cufflinks 2.49        
cufflinks 0.235        
cufflinks 0.338        
cufflinks 0.864        
cufflinks 0.298        
cufflinks 0.013     Low Low
cufflinks 2.54        
cufflinks 0.576        
cufflinks 1.636        
cufflinks 1.057        
cufflinks 3.108       High
cufflinks 0.487        
cufflinks 2.201        
cufflinks 2.104        
cufflinks 0.24        
cufflinks 2.682        
cufflinks 0.619        

0 Strain