Gene : Glyma.17G132300 G. max Wm82.a2.v1
Defline:  (1 of 7) 2.3.3.10 - Hydroxymethylglutaryl-CoA synthase / Hydroxymethylglutaryl coenzyme alpha-condensing enzyme Genomic Order:  1323
Name:  ? Glyma.17G132300 Secondary Identifier:  ? PAC:30482392
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5910 Glycine max pathologic  
Gmax PWY-922 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G132300 0.5kb upstream 0.5kb upstream 5365   true Chr17: 10626425-10631789 Glycine max
Glyma.17G132300 0.5kb upstream 0.5kb upstream 500   false Chr17: 10626425-10626924 Glycine max
Glyma.17G132300 0.5kb downstream 0.5kb downstream 5365   true Chr17: 10626925-10632289 Glycine max
Glyma.17G132300 0.5kb downstream 0.5kb downstream 500   false Chr17: 10631790-10632289 Glycine max
Glyma.17G132300 1.0kb upstream 1.0kb upstream 5865   true Chr17: 10625925-10631789 Glycine max
Glyma.17G132300 1.0kb upstream 1.0kb upstream 1000   false Chr17: 10625925-10626924 Glycine max
Glyma.17G132300 1.0kb downstream 1.0kb downstream 5865   true Chr17: 10626925-10632789 Glycine max
Glyma.17G132300 1.0kb downstream 1.0kb downstream 1000   false Chr17: 10631790-10632789 Glycine max
Glyma.17G132300 2.0kb upstream 2.0kb upstream 6865   true Chr17: 10624925-10631789 Glycine max
Glyma.17G132300 2.0kb upstream 2.0kb upstream 2000   false Chr17: 10624925-10626924 Glycine max
Glyma.17G132300 2.0kb downstream 2.0kb downstream 6865   true Chr17: 10626925-10633789 Glycine max
Glyma.17G132300 2.0kb downstream 2.0kb downstream 2000   false Chr17: 10631790-10633789 Glycine max
Glyma.17G132300 5.0kb upstream 5.0kb upstream 9865   true Chr17: 10621925-10631789 Glycine max
Glyma.17G132300 5.0kb upstream 5.0kb upstream 5000   false Chr17: 10621925-10626924 Glycine max
Glyma.17G132300 5.0kb downstream 5.0kb downstream 9865   true Chr17: 10626925-10636789 Glycine max
Glyma.17G132300 5.0kb downstream 5.0kb downstream 5000   false Chr17: 10631790-10636789 Glycine max
Glyma.17G132300 10.0kb upstream 10.0kb upstream 14865   true Chr17: 10616925-10631789 Glycine max
Glyma.17G132300 10.0kb upstream 10.0kb upstream 10000   false Chr17: 10616925-10626924 Glycine max
Glyma.17G132300 10.0kb downstream 10.0kb downstream 14865   true Chr17: 10626925-10641789 Glycine max
Glyma.17G132300 10.0kb downstream 10.0kb downstream 10000   false Chr17: 10631790-10641789 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311073 5265 Fabidae View MSA
124060634 5270 Rosid View MSA
123746885 5271 Pentapetalae View MSA
122791824 5272 Eudicot View MSA
122042701 5273 Angiosperm View MSA
121346246 5274 Embryophyte View MSA
123424795 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.4543 0.0 121.966 High High
cufflinks 32.8375 0.0 120.04 High  
cufflinks 10.6781 0.0 38.1006   Low
cufflinks 20.0018 0.0 69.5857 High  
cufflinks 22.9175 0.0 80.1457 High  
cufflinks 41.4706 0.0 156.966 High High
cufflinks 10.1119 0.0 36.3349   Low
cufflinks 12.1939 0.0 36.9059    
cufflinks 14.249 0.0 42.5699    
cufflinks 4.584        
cufflinks 1.12       Low
cufflinks 4.168        
cufflinks 5.838        
cufflinks 5.829        
cufflinks 0.737       Low
cufflinks 4.447        
cufflinks 2.437        
cufflinks 8.498     High High
cufflinks 7.444     High High
cufflinks 4.42        
cufflinks 1.43       Low
cufflinks 5.144        
cufflinks 5.741        
cufflinks 1.968        
cufflinks 4.577        
cufflinks 2.144        

0 Strain