Gene : Glyma.17G133200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31032:SF1 - PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED Genomic Order:  1332
Name:  ? Glyma.17G133200 Secondary Identifier:  ? PAC:30479222
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G133200 0.5kb upstream 0.5kb upstream 5188   true Chr17: 10731906-10737093 Glycine max
Glyma.17G133200 0.5kb upstream 0.5kb upstream 500   false Chr17: 10736594-10737093 Glycine max
Glyma.17G133200 0.5kb downstream 0.5kb downstream 5188   true Chr17: 10731406-10736593 Glycine max
Glyma.17G133200 0.5kb downstream 0.5kb downstream 500   false Chr17: 10731406-10731905 Glycine max
Glyma.17G133200 1.0kb upstream 1.0kb upstream 5688   true Chr17: 10731906-10737593 Glycine max
Glyma.17G133200 1.0kb upstream 1.0kb upstream 1000   false Chr17: 10736594-10737593 Glycine max
Glyma.17G133200 1.0kb downstream 1.0kb downstream 5688   true Chr17: 10730906-10736593 Glycine max
Glyma.17G133200 1.0kb downstream 1.0kb downstream 1000   false Chr17: 10730906-10731905 Glycine max
Glyma.17G133200 2.0kb upstream 2.0kb upstream 6688   true Chr17: 10731906-10738593 Glycine max
Glyma.17G133200 2.0kb upstream 2.0kb upstream 2000   false Chr17: 10736594-10738593 Glycine max
Glyma.17G133200 2.0kb downstream 2.0kb downstream 6688   true Chr17: 10729906-10736593 Glycine max
Glyma.17G133200 2.0kb downstream 2.0kb downstream 2000   false Chr17: 10729906-10731905 Glycine max
Glyma.17G133200 5.0kb upstream 5.0kb upstream 9688   true Chr17: 10731906-10741593 Glycine max
Glyma.17G133200 5.0kb upstream 5.0kb upstream 5000   false Chr17: 10736594-10741593 Glycine max
Glyma.17G133200 5.0kb downstream 5.0kb downstream 9688   true Chr17: 10726906-10736593 Glycine max
Glyma.17G133200 5.0kb downstream 5.0kb downstream 5000   false Chr17: 10726906-10731905 Glycine max
Glyma.17G133200 10.0kb upstream 10.0kb upstream 14688   true Chr17: 10731906-10746593 Glycine max
Glyma.17G133200 10.0kb upstream 10.0kb upstream 10000   false Chr17: 10736594-10746593 Glycine max
Glyma.17G133200 10.0kb downstream 10.0kb downstream 14688   true Chr17: 10721906-10736593 Glycine max
Glyma.17G133200 10.0kb downstream 10.0kb downstream 10000   false Chr17: 10721906-10731905 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312093 5265 Fabidae View MSA
124060834 5270 Rosid View MSA
123741079 5271 Pentapetalae View MSA
122790680 5272 Eudicot View MSA
122043689 5273 Angiosperm View MSA
121345999 5274 Embryophyte View MSA
123428179 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 61.8932 0.0 174.901 High High
cufflinks 23.7865 0.0 63.4884 High  
cufflinks 9.63637 0.0 26.5204    
cufflinks 19.3655 0.0 51.6985    
cufflinks 1.62975 0.0 5.63029   Low
cufflinks 1.37515 0.0 4.81804   Low
cufflinks 14.3578 0.0 38.6829    
cufflinks 12.3663 0.0 33.496    
cufflinks 0.771309 0.0 2.81213   Low
cufflinks 3.795        
cufflinks 0.007     Low Low
cufflinks 4.25        
cufflinks 0.011     Low Low
cufflinks 0.008     Low Low
cufflinks 0.07        
cufflinks 20.388     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 5.485        
cufflinks 6.127        
cufflinks 24.178     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 24.179     High  
cufflinks 12.142     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 26.033     High  
cufflinks 0.003     Low Low

0 Strain