Gene : Glyma.17G135100 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR33593:SF2 - F5O11.5 Genomic Order:  1351
Name:  ? Glyma.17G135100 Secondary Identifier:  ? PAC:30480116
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G135100 0.5kb upstream 0.5kb upstream 2076   true Chr17: 10870210-10872285 Glycine max
Glyma.17G135100 0.5kb upstream 0.5kb upstream 500   false Chr17: 10870210-10870709 Glycine max
Glyma.17G135100 0.5kb downstream 0.5kb downstream 2076   true Chr17: 10870710-10872785 Glycine max
Glyma.17G135100 0.5kb downstream 0.5kb downstream 500   false Chr17: 10872286-10872785 Glycine max
Glyma.17G135100 1.0kb upstream 1.0kb upstream 2576   true Chr17: 10869710-10872285 Glycine max
Glyma.17G135100 1.0kb upstream 1.0kb upstream 1000   false Chr17: 10869710-10870709 Glycine max
Glyma.17G135100 1.0kb downstream 1.0kb downstream 2576   true Chr17: 10870710-10873285 Glycine max
Glyma.17G135100 1.0kb downstream 1.0kb downstream 1000   false Chr17: 10872286-10873285 Glycine max
Glyma.17G135100 2.0kb upstream 2.0kb upstream 3576   true Chr17: 10868710-10872285 Glycine max
Glyma.17G135100 2.0kb upstream 2.0kb upstream 2000   false Chr17: 10868710-10870709 Glycine max
Glyma.17G135100 2.0kb downstream 2.0kb downstream 3576   true Chr17: 10870710-10874285 Glycine max
Glyma.17G135100 2.0kb downstream 2.0kb downstream 2000   false Chr17: 10872286-10874285 Glycine max
Glyma.17G135100 5.0kb upstream 5.0kb upstream 6576   true Chr17: 10865710-10872285 Glycine max
Glyma.17G135100 5.0kb upstream 5.0kb upstream 5000   false Chr17: 10865710-10870709 Glycine max
Glyma.17G135100 5.0kb downstream 5.0kb downstream 6576   true Chr17: 10870710-10877285 Glycine max
Glyma.17G135100 5.0kb downstream 5.0kb downstream 5000   false Chr17: 10872286-10877285 Glycine max
Glyma.17G135100 10.0kb upstream 10.0kb upstream 11576   true Chr17: 10860710-10872285 Glycine max
Glyma.17G135100 10.0kb upstream 10.0kb upstream 10000   false Chr17: 10860710-10870709 Glycine max
Glyma.17G135100 10.0kb downstream 10.0kb downstream 11576   true Chr17: 10870710-10882285 Glycine max
Glyma.17G135100 10.0kb downstream 10.0kb downstream 10000   false Chr17: 10872286-10882285 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041482 5273 Angiosperm View MSA
122310790 5265 Fabidae View MSA
124070642 5270 Rosid View MSA
123743657 5271 Pentapetalae View MSA
122790548 5272 Eudicot View MSA
121348528 5274 Embryophyte View MSA
123380900 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.01177 0.0 6.84214    
cufflinks 0.166462 0.0 0.65489 Low Low
cufflinks 15.9211 0.0 42.9281   High
cufflinks 0.501396 0.0 1.8809    
cufflinks 2.98852 0.0 9.61486    
cufflinks 5.12511 0.0 15.3575    
cufflinks 0.0823567 0.0 0.331442 Low Low
cufflinks 0.666617 0.0 2.46995    
cufflinks 2.25166 0.0 7.57665    
cufflinks 0.864       Low
cufflinks 88.358     High High
cufflinks 11.341     High  
cufflinks 2.272        
cufflinks 1.39        
cufflinks 84.123     High High
cufflinks 7.102        
cufflinks 12.277     High  
cufflinks 2.44        
cufflinks 0.342       Low
cufflinks 7.622     High  
cufflinks 56.312     High High
cufflinks 2.318        
cufflinks 1.164       Low
cufflinks 68.89     High High
cufflinks 8.088     High  
cufflinks 51.246     High High

0 Strain