Gene : Glyma.17G135500 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11679//PTHR11679:SF38 - VESICLE PROTEIN SORTING-ASSOCIATED Genomic Order:  1355
Name:  ? Glyma.17G135500 Secondary Identifier:  ? PAC:30479013
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G135500 0.5kb upstream 0.5kb upstream 12740   true Chr17: 10900247-10912986 Glycine max
Glyma.17G135500 0.5kb upstream 0.5kb upstream 500   false Chr17: 10900247-10900746 Glycine max
Glyma.17G135500 0.5kb downstream 0.5kb downstream 12740   true Chr17: 10900747-10913486 Glycine max
Glyma.17G135500 0.5kb downstream 0.5kb downstream 500   false Chr17: 10912987-10913486 Glycine max
Glyma.17G135500 1.0kb upstream 1.0kb upstream 13240   true Chr17: 10899747-10912986 Glycine max
Glyma.17G135500 1.0kb upstream 1.0kb upstream 1000   false Chr17: 10899747-10900746 Glycine max
Glyma.17G135500 1.0kb downstream 1.0kb downstream 13240   true Chr17: 10900747-10913986 Glycine max
Glyma.17G135500 1.0kb downstream 1.0kb downstream 1000   false Chr17: 10912987-10913986 Glycine max
Glyma.17G135500 2.0kb upstream 2.0kb upstream 14240   true Chr17: 10898747-10912986 Glycine max
Glyma.17G135500 2.0kb upstream 2.0kb upstream 2000   false Chr17: 10898747-10900746 Glycine max
Glyma.17G135500 2.0kb downstream 2.0kb downstream 14240   true Chr17: 10900747-10914986 Glycine max
Glyma.17G135500 2.0kb downstream 2.0kb downstream 2000   false Chr17: 10912987-10914986 Glycine max
Glyma.17G135500 5.0kb upstream 5.0kb upstream 17240   true Chr17: 10895747-10912986 Glycine max
Glyma.17G135500 5.0kb upstream 5.0kb upstream 5000   false Chr17: 10895747-10900746 Glycine max
Glyma.17G135500 5.0kb downstream 5.0kb downstream 17240   true Chr17: 10900747-10917986 Glycine max
Glyma.17G135500 5.0kb downstream 5.0kb downstream 5000   false Chr17: 10912987-10917986 Glycine max
Glyma.17G135500 10.0kb upstream 10.0kb upstream 22240   true Chr17: 10890747-10912986 Glycine max
Glyma.17G135500 10.0kb upstream 10.0kb upstream 10000   false Chr17: 10890747-10900746 Glycine max
Glyma.17G135500 10.0kb downstream 10.0kb downstream 22240   true Chr17: 10900747-10922986 Glycine max
Glyma.17G135500 10.0kb downstream 10.0kb downstream 10000   false Chr17: 10912987-10922986 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307701 5265 Fabidae View MSA
124073008 5270 Rosid View MSA
123752933 5271 Pentapetalae View MSA
122792100 5272 Eudicot View MSA
122047096 5273 Angiosperm View MSA
121350435 5274 Embryophyte View MSA
123426000 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.088 0.0 45.8694   Low
cufflinks 20.0201 0.0 54.1534    
cufflinks 24.8746 0.0 68.3564 High  
cufflinks 24.509 0.0 67.1982 High  
cufflinks 21.9799 0.0 59.7212 High  
cufflinks 29.8875 0.0 83.3056 High High
cufflinks 25.1465 0.0 68.9377 High  
cufflinks 21.957 0.0 59.7105 High  
cufflinks 27.0 0.0 74.5811 High  
cufflinks 5.693        
cufflinks 4.556        
cufflinks 4.662        
cufflinks 5.695        
cufflinks 5.429        
cufflinks 3.806       Low
cufflinks 4.806        
cufflinks 4.802        
cufflinks 4.99        
cufflinks 4.401        
cufflinks 4.673        
cufflinks 4.306        
cufflinks 4.649        
cufflinks 3.119       Low
cufflinks 4.948        
cufflinks 4.255        
cufflinks 7.327     High High

0 Strain