Gene : Glyma.17G136200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31500:SF7 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Genomic Order:  1362
Name:  ? Glyma.17G136200 Secondary Identifier:  ? PAC:30478773
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G136200 0.5kb upstream 0.5kb upstream 6436   true Chr17: 10982415-10988850 Glycine max
Glyma.17G136200 0.5kb upstream 0.5kb upstream 500   false Chr17: 10988351-10988850 Glycine max
Glyma.17G136200 0.5kb downstream 0.5kb downstream 6436   true Chr17: 10981915-10988350 Glycine max
Glyma.17G136200 0.5kb downstream 0.5kb downstream 500   false Chr17: 10981915-10982414 Glycine max
Glyma.17G136200 1.0kb upstream 1.0kb upstream 6936   true Chr17: 10982415-10989350 Glycine max
Glyma.17G136200 1.0kb upstream 1.0kb upstream 1000   false Chr17: 10988351-10989350 Glycine max
Glyma.17G136200 1.0kb downstream 1.0kb downstream 6936   true Chr17: 10981415-10988350 Glycine max
Glyma.17G136200 1.0kb downstream 1.0kb downstream 1000   false Chr17: 10981415-10982414 Glycine max
Glyma.17G136200 2.0kb upstream 2.0kb upstream 7936   true Chr17: 10982415-10990350 Glycine max
Glyma.17G136200 2.0kb upstream 2.0kb upstream 2000   false Chr17: 10988351-10990350 Glycine max
Glyma.17G136200 2.0kb downstream 2.0kb downstream 7936   true Chr17: 10980415-10988350 Glycine max
Glyma.17G136200 2.0kb downstream 2.0kb downstream 2000   false Chr17: 10980415-10982414 Glycine max
Glyma.17G136200 5.0kb upstream 5.0kb upstream 10936   true Chr17: 10982415-10993350 Glycine max
Glyma.17G136200 5.0kb upstream 5.0kb upstream 5000   false Chr17: 10988351-10993350 Glycine max
Glyma.17G136200 5.0kb downstream 5.0kb downstream 10936   true Chr17: 10977415-10988350 Glycine max
Glyma.17G136200 5.0kb downstream 5.0kb downstream 5000   false Chr17: 10977415-10982414 Glycine max
Glyma.17G136200 10.0kb upstream 10.0kb upstream 15936   true Chr17: 10982415-10998350 Glycine max
Glyma.17G136200 10.0kb upstream 10.0kb upstream 10000   false Chr17: 10988351-10998350 Glycine max
Glyma.17G136200 10.0kb downstream 10.0kb downstream 15936   true Chr17: 10972415-10988350 Glycine max
Glyma.17G136200 10.0kb downstream 10.0kb downstream 10000   false Chr17: 10972415-10982414 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302466 5265 Fabidae View MSA
124071035 5270 Rosid View MSA
123753724 5271 Pentapetalae View MSA
122796118 5272 Eudicot View MSA
122049850 5273 Angiosperm View MSA
121348420 5274 Embryophyte View MSA
123380859 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.31804 0.0 13.0086   Low
cufflinks 2.61439 0.0 11.061   Low
cufflinks 10.9249 0.0 37.9154    
cufflinks 10.3162 0.0 35.9862    
cufflinks 24.1039 0.0 82.467 High  
cufflinks 23.2014 0.0 78.8452 High  
cufflinks 14.2977 0.0 48.5934    
cufflinks 15.038 0.0 50.8434    
cufflinks 28.5848 0.0 99.2587 High High
cufflinks 0.589        
cufflinks 2.64        
cufflinks 0.988        
cufflinks 3.703       High
cufflinks 3.041        
cufflinks 1.535        
cufflinks 0.265       Low
cufflinks 4.011       High
cufflinks 1.241        
cufflinks 0.429        
cufflinks 0.266       Low
cufflinks 2.643        
cufflinks 0.283       Low
cufflinks 0.345       Low
cufflinks 5.204       High
cufflinks 0.269       Low
cufflinks 4.373       High

0 Strain