Gene : Glyma.17G136600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31100:SF15 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 24-RELATED Genomic Order:  1366
Name:  ? Glyma.17G136600 Secondary Identifier:  ? PAC:30479689
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G136600 0.5kb upstream 0.5kb upstream 2439   true Chr17: 11034261-11036699 Glycine max
Glyma.17G136600 0.5kb upstream 0.5kb upstream 500   false Chr17: 11034261-11034760 Glycine max
Glyma.17G136600 0.5kb downstream 0.5kb downstream 2439   true Chr17: 11034761-11037199 Glycine max
Glyma.17G136600 0.5kb downstream 0.5kb downstream 500   false Chr17: 11036700-11037199 Glycine max
Glyma.17G136600 1.0kb upstream 1.0kb upstream 2939   true Chr17: 11033761-11036699 Glycine max
Glyma.17G136600 1.0kb upstream 1.0kb upstream 1000   false Chr17: 11033761-11034760 Glycine max
Glyma.17G136600 1.0kb downstream 1.0kb downstream 2939   true Chr17: 11034761-11037699 Glycine max
Glyma.17G136600 1.0kb downstream 1.0kb downstream 1000   false Chr17: 11036700-11037699 Glycine max
Glyma.17G136600 2.0kb upstream 2.0kb upstream 3939   true Chr17: 11032761-11036699 Glycine max
Glyma.17G136600 2.0kb upstream 2.0kb upstream 2000   false Chr17: 11032761-11034760 Glycine max
Glyma.17G136600 2.0kb downstream 2.0kb downstream 3939   true Chr17: 11034761-11038699 Glycine max
Glyma.17G136600 2.0kb downstream 2.0kb downstream 2000   false Chr17: 11036700-11038699 Glycine max
Glyma.17G136600 5.0kb upstream 5.0kb upstream 6939   true Chr17: 11029761-11036699 Glycine max
Glyma.17G136600 5.0kb upstream 5.0kb upstream 5000   false Chr17: 11029761-11034760 Glycine max
Glyma.17G136600 5.0kb downstream 5.0kb downstream 6939   true Chr17: 11034761-11041699 Glycine max
Glyma.17G136600 5.0kb downstream 5.0kb downstream 5000   false Chr17: 11036700-11041699 Glycine max
Glyma.17G136600 10.0kb upstream 10.0kb upstream 11939   true Chr17: 11024761-11036699 Glycine max
Glyma.17G136600 10.0kb upstream 10.0kb upstream 10000   false Chr17: 11024761-11034760 Glycine max
Glyma.17G136600 10.0kb downstream 10.0kb downstream 11939   true Chr17: 11034761-11046699 Glycine max
Glyma.17G136600 10.0kb downstream 10.0kb downstream 10000   false Chr17: 11036700-11046699 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314745 5265 Fabidae View MSA
124066215 5270 Rosid View MSA
123751689 5271 Pentapetalae View MSA
122796160 5272 Eudicot View MSA
122048201 5273 Angiosperm View MSA
121348557 5274 Embryophyte View MSA
123380913 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.18214 0.0 9.82863    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0954313 0.0 0.378704 Low Low
cufflinks 10.1811 0.0 27.589    
cufflinks 6.98144 0.0 19.5213    
cufflinks 0.443186 0.0 1.64631    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 6.47726 0.0 18.2127    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 9.797     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 16.667     High  
cufflinks 20.605     High  
cufflinks 1.155        
cufflinks 0.01     Low Low
cufflinks 8.405     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 8.074     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 12.465     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 15.923     High  

0 Strain