Gene : Glyma.17G138200 G. max Wm82.a2.v1
Defline:  (1 of 10) PF04690 - YABBY protein (YABBY) Genomic Order:  1382
Name:  ? Glyma.17G138200 Secondary Identifier:  ? PAC:30480940
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G138200 0.5kb upstream 0.5kb upstream 4129   true Chr17: 11167950-11172078 Glycine max
Glyma.17G138200 0.5kb upstream 0.5kb upstream 500   false Chr17: 11167950-11168449 Glycine max
Glyma.17G138200 0.5kb downstream 0.5kb downstream 4129   true Chr17: 11168450-11172578 Glycine max
Glyma.17G138200 0.5kb downstream 0.5kb downstream 500   false Chr17: 11172079-11172578 Glycine max
Glyma.17G138200 1.0kb upstream 1.0kb upstream 4629   true Chr17: 11167450-11172078 Glycine max
Glyma.17G138200 1.0kb upstream 1.0kb upstream 1000   false Chr17: 11167450-11168449 Glycine max
Glyma.17G138200 1.0kb downstream 1.0kb downstream 4629   true Chr17: 11168450-11173078 Glycine max
Glyma.17G138200 1.0kb downstream 1.0kb downstream 1000   false Chr17: 11172079-11173078 Glycine max
Glyma.17G138200 2.0kb upstream 2.0kb upstream 5629   true Chr17: 11166450-11172078 Glycine max
Glyma.17G138200 2.0kb upstream 2.0kb upstream 2000   false Chr17: 11166450-11168449 Glycine max
Glyma.17G138200 2.0kb downstream 2.0kb downstream 5629   true Chr17: 11168450-11174078 Glycine max
Glyma.17G138200 2.0kb downstream 2.0kb downstream 2000   false Chr17: 11172079-11174078 Glycine max
Glyma.17G138200 5.0kb upstream 5.0kb upstream 8629   true Chr17: 11163450-11172078 Glycine max
Glyma.17G138200 5.0kb upstream 5.0kb upstream 5000   false Chr17: 11163450-11168449 Glycine max
Glyma.17G138200 5.0kb downstream 5.0kb downstream 8629   true Chr17: 11168450-11177078 Glycine max
Glyma.17G138200 5.0kb downstream 5.0kb downstream 5000   false Chr17: 11172079-11177078 Glycine max
Glyma.17G138200 10.0kb upstream 10.0kb upstream 13629   true Chr17: 11158450-11172078 Glycine max
Glyma.17G138200 10.0kb upstream 10.0kb upstream 10000   false Chr17: 11158450-11168449 Glycine max
Glyma.17G138200 10.0kb downstream 10.0kb downstream 13629   true Chr17: 11168450-11182078 Glycine max
Glyma.17G138200 10.0kb downstream 10.0kb downstream 10000   false Chr17: 11172079-11182078 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305490 5265 Fabidae View MSA
124070800 5270 Rosid View MSA
123746841 5271 Pentapetalae View MSA
122797230 5272 Eudicot View MSA
122048465 5273 Angiosperm View MSA
121349155 5274 Embryophyte View MSA
123426058 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.75515 0.0 27.5381    
cufflinks 73.3516 0.0 270.998 High High
cufflinks 1.1117 0.0 6.52586    
cufflinks 3.29375 0.0 15.4086    
cufflinks 0.568918 0.0 2.80883   Low
cufflinks 7.57553 0.0 32.0758    
cufflinks 7.12851 0.0 25.8802    
cufflinks 1.20351 0.0 5.40184    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.21        
cufflinks 0.004     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low Low
cufflinks 4.787        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.728        
cufflinks 15.085     High  
cufflinks 5.356        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 5.252        
cufflinks 5.283        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 5.028        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain