Gene : Glyma.17G138600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10683:SF10 - TRANSALDOLASE-LIKE PROTEIN Genomic Order:  1386
Name:  ? Glyma.17G138600 Secondary Identifier:  ? PAC:30479379
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax NONOXIPENT-PWY Glycine max pathologic  
Gmax PENTOSE-P-PWY Glycine max pathologic  
Gmax PWY-5723 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G138600 0.5kb upstream 0.5kb upstream 5145   true Chr17: 11234767-11239911 Glycine max
Glyma.17G138600 0.5kb upstream 0.5kb upstream 500   false Chr17: 11239412-11239911 Glycine max
Glyma.17G138600 0.5kb downstream 0.5kb downstream 5145   true Chr17: 11234267-11239411 Glycine max
Glyma.17G138600 0.5kb downstream 0.5kb downstream 500   false Chr17: 11234267-11234766 Glycine max
Glyma.17G138600 1.0kb upstream 1.0kb upstream 5645   true Chr17: 11234767-11240411 Glycine max
Glyma.17G138600 1.0kb upstream 1.0kb upstream 1000   false Chr17: 11239412-11240411 Glycine max
Glyma.17G138600 1.0kb downstream 1.0kb downstream 5645   true Chr17: 11233767-11239411 Glycine max
Glyma.17G138600 1.0kb downstream 1.0kb downstream 1000   false Chr17: 11233767-11234766 Glycine max
Glyma.17G138600 2.0kb upstream 2.0kb upstream 6645   true Chr17: 11234767-11241411 Glycine max
Glyma.17G138600 2.0kb upstream 2.0kb upstream 2000   false Chr17: 11239412-11241411 Glycine max
Glyma.17G138600 2.0kb downstream 2.0kb downstream 6645   true Chr17: 11232767-11239411 Glycine max
Glyma.17G138600 2.0kb downstream 2.0kb downstream 2000   false Chr17: 11232767-11234766 Glycine max
Glyma.17G138600 5.0kb upstream 5.0kb upstream 9645   true Chr17: 11234767-11244411 Glycine max
Glyma.17G138600 5.0kb upstream 5.0kb upstream 5000   false Chr17: 11239412-11244411 Glycine max
Glyma.17G138600 5.0kb downstream 5.0kb downstream 9645   true Chr17: 11229767-11239411 Glycine max
Glyma.17G138600 5.0kb downstream 5.0kb downstream 5000   false Chr17: 11229767-11234766 Glycine max
Glyma.17G138600 10.0kb upstream 10.0kb upstream 14645   true Chr17: 11234767-11249411 Glycine max
Glyma.17G138600 10.0kb upstream 10.0kb upstream 10000   false Chr17: 11239412-11249411 Glycine max
Glyma.17G138600 10.0kb downstream 10.0kb downstream 14645   true Chr17: 11224767-11239411 Glycine max
Glyma.17G138600 10.0kb downstream 10.0kb downstream 10000   false Chr17: 11224767-11234766 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305152 5265 Fabidae View MSA
124061321 5270 Rosid View MSA
123737527 5271 Pentapetalae View MSA
122787081 5272 Eudicot View MSA
122043979 5273 Angiosperm View MSA
121346789 5274 Embryophyte View MSA
123424119 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.77 0.0 66.093 High High
cufflinks 11.5485 0.0 31.5828    
cufflinks 8.8326 0.0 24.6867   Low
cufflinks 11.546 0.0 31.5752    
cufflinks 21.5881 0.0 57.6069 High High
cufflinks 16.4702 0.0 44.2023    
cufflinks 16.2277 0.0 43.581    
cufflinks 11.3949 0.0 31.1694    
cufflinks 12.0479 0.0 32.8247    
cufflinks 4.568        
cufflinks 0.685       Low
cufflinks 3.274        
cufflinks 8.155     High High
cufflinks 9.622     High High
cufflinks 1.258       Low
cufflinks 4.449        
cufflinks 1.786        
cufflinks 4.716        
cufflinks 4.664        
cufflinks 3.342        
cufflinks 1.376       Low
cufflinks 3.614        
cufflinks 4.849        
cufflinks 1.175       Low
cufflinks 3.992        
cufflinks 2.109        

0 Strain