Gene : Glyma.17G139100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR14969:SF13 - AT30094P Genomic Order:  1391
Name:  ? Glyma.17G139100 Secondary Identifier:  ? PAC:30481024
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax TRIGLSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G139100 0.5kb upstream 0.5kb upstream 4058   true Chr17: 11289224-11293281 Glycine max
Glyma.17G139100 0.5kb upstream 0.5kb upstream 500   false Chr17: 11289224-11289723 Glycine max
Glyma.17G139100 0.5kb downstream 0.5kb downstream 4058   true Chr17: 11289724-11293781 Glycine max
Glyma.17G139100 0.5kb downstream 0.5kb downstream 500   false Chr17: 11293282-11293781 Glycine max
Glyma.17G139100 1.0kb upstream 1.0kb upstream 4558   true Chr17: 11288724-11293281 Glycine max
Glyma.17G139100 1.0kb upstream 1.0kb upstream 1000   false Chr17: 11288724-11289723 Glycine max
Glyma.17G139100 1.0kb downstream 1.0kb downstream 4558   true Chr17: 11289724-11294281 Glycine max
Glyma.17G139100 1.0kb downstream 1.0kb downstream 1000   false Chr17: 11293282-11294281 Glycine max
Glyma.17G139100 2.0kb upstream 2.0kb upstream 5558   true Chr17: 11287724-11293281 Glycine max
Glyma.17G139100 2.0kb upstream 2.0kb upstream 2000   false Chr17: 11287724-11289723 Glycine max
Glyma.17G139100 2.0kb downstream 2.0kb downstream 5558   true Chr17: 11289724-11295281 Glycine max
Glyma.17G139100 2.0kb downstream 2.0kb downstream 2000   false Chr17: 11293282-11295281 Glycine max
Glyma.17G139100 5.0kb upstream 5.0kb upstream 8558   true Chr17: 11284724-11293281 Glycine max
Glyma.17G139100 5.0kb upstream 5.0kb upstream 5000   false Chr17: 11284724-11289723 Glycine max
Glyma.17G139100 5.0kb downstream 5.0kb downstream 8558   true Chr17: 11289724-11298281 Glycine max
Glyma.17G139100 5.0kb downstream 5.0kb downstream 5000   false Chr17: 11293282-11298281 Glycine max
Glyma.17G139100 10.0kb upstream 10.0kb upstream 13558   true Chr17: 11279724-11293281 Glycine max
Glyma.17G139100 10.0kb upstream 10.0kb upstream 10000   false Chr17: 11279724-11289723 Glycine max
Glyma.17G139100 10.0kb downstream 10.0kb downstream 13558   true Chr17: 11289724-11303281 Glycine max
Glyma.17G139100 10.0kb downstream 10.0kb downstream 10000   false Chr17: 11293282-11303281 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301882 5265 Fabidae View MSA
124068093 5270 Rosid View MSA
123737030 5271 Pentapetalae View MSA
122788421 5272 Eudicot View MSA
122043486 5273 Angiosperm View MSA
121349083 5274 Embryophyte View MSA
123381157 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.58549 0.0 9.24279   Low
cufflinks 5.99558 0.0 27.5922    
cufflinks 3.87346 0.0 20.008    
cufflinks 6.81722 0.0 30.3593    
cufflinks 7.54736 0.0 31.7765   High
cufflinks 3.19174 0.0 13.8645    
cufflinks 3.44334 0.0 18.5384    
cufflinks 8.2118 0.0 33.6273   High
cufflinks 3.77651 0.0 19.3545    
cufflinks 0.646       High
cufflinks 0.13       Low
cufflinks 0.287        
cufflinks 0.348        
cufflinks 0.676       High
cufflinks 0.25        
cufflinks 0.484        
cufflinks 0.211        
cufflinks 0.522        
cufflinks 0.476        
cufflinks 0.478        
cufflinks 0.248        
cufflinks 0.442        
cufflinks 0.618       High
cufflinks 0.151       Low
cufflinks 0.434        
cufflinks 0.151       Low

0 Strain