Gene : Glyma.17G139500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31731:SF8 - BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN Genomic Order:  1395
Name:  ? Glyma.17G139500 Secondary Identifier:  ? PAC:30482435
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G139500 0.5kb upstream 0.5kb upstream 1258   true Chr17: 11341525-11342782 Glycine max
Glyma.17G139500 0.5kb upstream 0.5kb upstream 500   false Chr17: 11342283-11342782 Glycine max
Glyma.17G139500 0.5kb downstream 0.5kb downstream 1258   true Chr17: 11341025-11342282 Glycine max
Glyma.17G139500 0.5kb downstream 0.5kb downstream 500   false Chr17: 11341025-11341524 Glycine max
Glyma.17G139500 1.0kb upstream 1.0kb upstream 1758   true Chr17: 11341525-11343282 Glycine max
Glyma.17G139500 1.0kb upstream 1.0kb upstream 1000   false Chr17: 11342283-11343282 Glycine max
Glyma.17G139500 1.0kb downstream 1.0kb downstream 1758   true Chr17: 11340525-11342282 Glycine max
Glyma.17G139500 1.0kb downstream 1.0kb downstream 1000   false Chr17: 11340525-11341524 Glycine max
Glyma.17G139500 2.0kb upstream 2.0kb upstream 2758   true Chr17: 11341525-11344282 Glycine max
Glyma.17G139500 2.0kb upstream 2.0kb upstream 2000   false Chr17: 11342283-11344282 Glycine max
Glyma.17G139500 2.0kb downstream 2.0kb downstream 2758   true Chr17: 11339525-11342282 Glycine max
Glyma.17G139500 2.0kb downstream 2.0kb downstream 2000   false Chr17: 11339525-11341524 Glycine max
Glyma.17G139500 5.0kb upstream 5.0kb upstream 5758   true Chr17: 11341525-11347282 Glycine max
Glyma.17G139500 5.0kb upstream 5.0kb upstream 5000   false Chr17: 11342283-11347282 Glycine max
Glyma.17G139500 5.0kb downstream 5.0kb downstream 5758   true Chr17: 11336525-11342282 Glycine max
Glyma.17G139500 5.0kb downstream 5.0kb downstream 5000   false Chr17: 11336525-11341524 Glycine max
Glyma.17G139500 10.0kb upstream 10.0kb upstream 10758   true Chr17: 11341525-11352282 Glycine max
Glyma.17G139500 10.0kb upstream 10.0kb upstream 10000   false Chr17: 11342283-11352282 Glycine max
Glyma.17G139500 10.0kb downstream 10.0kb downstream 10758   true Chr17: 11331525-11342282 Glycine max
Glyma.17G139500 10.0kb downstream 10.0kb downstream 10000   false Chr17: 11331525-11341524 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299174 5265 Fabidae View MSA
124069364 5270 Rosid View MSA
123753397 5271 Pentapetalae View MSA
122797404 5272 Eudicot View MSA
122050019 5273 Angiosperm View MSA
123429239 5275 Viridiplantae View MSA
121311688 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.127619 0.0 0.528235 Low Low
cufflinks 19.2355 0.0 54.8805    
cufflinks 3.06915 0.0 10.9442    
cufflinks 16.1152 0.0 47.061    
cufflinks 28.8439 0.0 79.0172 High  
cufflinks 17.7857 0.0 51.084    
cufflinks 6.02908 0.0 20.1042    
cufflinks 20.2204 0.0 57.2979    
cufflinks 88.0698 0.0 236.888 High High
cufflinks 5.289        
cufflinks 0.432       Low
cufflinks 6.034        
cufflinks 15.92     High High
cufflinks 24.794     High High
cufflinks 8.012     High  
cufflinks 1.722        
cufflinks 11.253     High  
cufflinks 4.84        
cufflinks 13.776     High High
cufflinks 0.506       Low
cufflinks 2.472        
cufflinks 0.928       Low
cufflinks 3.881        
cufflinks 2.944        
cufflinks 0.798       Low
cufflinks 4.621        

0 Strain