Gene : Glyma.17G127500 G. max Wm82.a2.v1
Defline:  (1 of 118) PF03514 - GRAS domain family (GRAS) Genomic Order:  1275
Name:  ? Glyma.17G127500 Secondary Identifier:  ? PAC:30482201
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G127500 0.5kb upstream 0.5kb upstream 2308   true Chr17: 10181173-10183480 Glycine max
Glyma.17G127500 0.5kb upstream 0.5kb upstream 500   false Chr17: 10182981-10183480 Glycine max
Glyma.17G127500 0.5kb downstream 0.5kb downstream 2308   true Chr17: 10180673-10182980 Glycine max
Glyma.17G127500 0.5kb downstream 0.5kb downstream 500   false Chr17: 10180673-10181172 Glycine max
Glyma.17G127500 1.0kb upstream 1.0kb upstream 2808   true Chr17: 10181173-10183980 Glycine max
Glyma.17G127500 1.0kb upstream 1.0kb upstream 1000   false Chr17: 10182981-10183980 Glycine max
Glyma.17G127500 1.0kb downstream 1.0kb downstream 2808   true Chr17: 10180173-10182980 Glycine max
Glyma.17G127500 1.0kb downstream 1.0kb downstream 1000   false Chr17: 10180173-10181172 Glycine max
Glyma.17G127500 2.0kb upstream 2.0kb upstream 3808   true Chr17: 10181173-10184980 Glycine max
Glyma.17G127500 2.0kb upstream 2.0kb upstream 2000   false Chr17: 10182981-10184980 Glycine max
Glyma.17G127500 2.0kb downstream 2.0kb downstream 3808   true Chr17: 10179173-10182980 Glycine max
Glyma.17G127500 2.0kb downstream 2.0kb downstream 2000   false Chr17: 10179173-10181172 Glycine max
Glyma.17G127500 5.0kb upstream 5.0kb upstream 6808   true Chr17: 10181173-10187980 Glycine max
Glyma.17G127500 5.0kb upstream 5.0kb upstream 5000   false Chr17: 10182981-10187980 Glycine max
Glyma.17G127500 5.0kb downstream 5.0kb downstream 6808   true Chr17: 10176173-10182980 Glycine max
Glyma.17G127500 5.0kb downstream 5.0kb downstream 5000   false Chr17: 10176173-10181172 Glycine max
Glyma.17G127500 10.0kb upstream 10.0kb upstream 11808   true Chr17: 10181173-10192980 Glycine max
Glyma.17G127500 10.0kb upstream 10.0kb upstream 10000   false Chr17: 10182981-10192980 Glycine max
Glyma.17G127500 10.0kb downstream 10.0kb downstream 11808   true Chr17: 10171173-10182980 Glycine max
Glyma.17G127500 10.0kb downstream 10.0kb downstream 10000   false Chr17: 10171173-10181172 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302152 5265 Fabidae View MSA
124070974 5270 Rosid View MSA
123749783 5271 Pentapetalae View MSA
122795701 5272 Eudicot View MSA
122051595 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0109511 0.0 0.0495265 Low  
cufflinks 0.0109023 0.0 0.0494423 Low  
cufflinks 1.0348 0.0 3.61749   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.279033 0.0 1.05373    
cufflinks 0.849384 0.0 3.01282   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0218851 0.0 0.0933223 Low  
cufflinks 0.0109811 0.0 0.0496675 Low  
cufflinks 0.017     Low  
cufflinks 0.186       High
cufflinks 0.035     Low  
cufflinks 0.264       High
cufflinks 0.094        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low  
cufflinks 0.274       High
cufflinks 0.008     Low Low
cufflinks 0.03     Low  
cufflinks 0.019     Low  
cufflinks 0.163        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.02     Low  
cufflinks 0.064        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.157        

0 Strain