Gene : Glyma.17G128000 G. max Wm82.a2.v1
Defline:  (1 of 3) 2.3.3.9 - Malate synthase / Malic-condensing enzyme Genomic Order:  1280
Name:  ? Glyma.17G128000 Secondary Identifier:  ? PAC:30481023
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax GLYOXYLATE-BYPASS Glycine max pathologic  
Gmax PWY-561 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G128000 0.5kb upstream 0.5kb upstream 4234   true Chr17: 10234185-10238418 Glycine max
Glyma.17G128000 0.5kb upstream 0.5kb upstream 500   false Chr17: 10234185-10234684 Glycine max
Glyma.17G128000 0.5kb downstream 0.5kb downstream 4234   true Chr17: 10234685-10238918 Glycine max
Glyma.17G128000 0.5kb downstream 0.5kb downstream 500   false Chr17: 10238419-10238918 Glycine max
Glyma.17G128000 1.0kb upstream 1.0kb upstream 4734   true Chr17: 10233685-10238418 Glycine max
Glyma.17G128000 1.0kb upstream 1.0kb upstream 1000   false Chr17: 10233685-10234684 Glycine max
Glyma.17G128000 1.0kb downstream 1.0kb downstream 4734   true Chr17: 10234685-10239418 Glycine max
Glyma.17G128000 1.0kb downstream 1.0kb downstream 1000   false Chr17: 10238419-10239418 Glycine max
Glyma.17G128000 2.0kb upstream 2.0kb upstream 5734   true Chr17: 10232685-10238418 Glycine max
Glyma.17G128000 2.0kb upstream 2.0kb upstream 2000   false Chr17: 10232685-10234684 Glycine max
Glyma.17G128000 2.0kb downstream 2.0kb downstream 5734   true Chr17: 10234685-10240418 Glycine max
Glyma.17G128000 2.0kb downstream 2.0kb downstream 2000   false Chr17: 10238419-10240418 Glycine max
Glyma.17G128000 5.0kb upstream 5.0kb upstream 8734   true Chr17: 10229685-10238418 Glycine max
Glyma.17G128000 5.0kb upstream 5.0kb upstream 5000   false Chr17: 10229685-10234684 Glycine max
Glyma.17G128000 5.0kb downstream 5.0kb downstream 8734   true Chr17: 10234685-10243418 Glycine max
Glyma.17G128000 5.0kb downstream 5.0kb downstream 5000   false Chr17: 10238419-10243418 Glycine max
Glyma.17G128000 10.0kb upstream 10.0kb upstream 13734   true Chr17: 10224685-10238418 Glycine max
Glyma.17G128000 10.0kb upstream 10.0kb upstream 10000   false Chr17: 10224685-10234684 Glycine max
Glyma.17G128000 10.0kb downstream 10.0kb downstream 13734   true Chr17: 10234685-10248418 Glycine max
Glyma.17G128000 10.0kb downstream 10.0kb downstream 10000   false Chr17: 10238419-10248418 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300258 5265 Fabidae View MSA
124066130 5270 Rosid View MSA
123738008 5271 Pentapetalae View MSA
122788677 5272 Eudicot View MSA
122048246 5273 Angiosperm View MSA
121346455 5274 Embryophyte View MSA
123425007 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.8808 0.0 80.2802 High  
cufflinks 0.202788 0.0 0.767896 Low  
cufflinks 135.319 0.0 496.958 High High
cufflinks 0.289093 0.0 1.07594    
cufflinks 6.25854 0.0 17.0597    
cufflinks 9.44321 0.0 25.2725    
cufflinks 0.0501755 0.0 0.200709 Low Low
cufflinks 1.28822 0.0 4.25014    
cufflinks 4.85639 0.0 13.5086    
cufflinks 0.574        
cufflinks 29.477     High High
cufflinks 35.853     High High
cufflinks 0.324        
cufflinks 4.035        
cufflinks 40.779     High High
cufflinks 0.134       Low
cufflinks 0.107       Low
cufflinks 0.444        
cufflinks 0.221        
cufflinks 0.602        
cufflinks 11.843     High  
cufflinks 0.222        
cufflinks 0.13       Low
cufflinks 17.053     High High
cufflinks 0.791        
cufflinks 2.579        

0 Strain