Gene : Glyma.17G128300 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR23359//PTHR23359:SF99 - NUCLEOTIDE KINASE Genomic Order:  1283
Name:  ? Glyma.17G128300 Secondary Identifier:  ? PAC:30482243
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6126 Glycine max pathologic  
Gmax PWY-7219 Glycine max pathologic  
Gmax PWY-7229 Glycine max pathologic  
Gmax PWY-841 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G128300 0.5kb upstream 0.5kb upstream 4025   true Chr17: 10256309-10260333 Glycine max
Glyma.17G128300 0.5kb upstream 0.5kb upstream 500   false Chr17: 10259834-10260333 Glycine max
Glyma.17G128300 0.5kb downstream 0.5kb downstream 4025   true Chr17: 10255809-10259833 Glycine max
Glyma.17G128300 0.5kb downstream 0.5kb downstream 500   false Chr17: 10255809-10256308 Glycine max
Glyma.17G128300 1.0kb upstream 1.0kb upstream 4525   true Chr17: 10256309-10260833 Glycine max
Glyma.17G128300 1.0kb upstream 1.0kb upstream 1000   false Chr17: 10259834-10260833 Glycine max
Glyma.17G128300 1.0kb downstream 1.0kb downstream 4525   true Chr17: 10255309-10259833 Glycine max
Glyma.17G128300 1.0kb downstream 1.0kb downstream 1000   false Chr17: 10255309-10256308 Glycine max
Glyma.17G128300 2.0kb upstream 2.0kb upstream 5525   true Chr17: 10256309-10261833 Glycine max
Glyma.17G128300 2.0kb upstream 2.0kb upstream 2000   false Chr17: 10259834-10261833 Glycine max
Glyma.17G128300 2.0kb downstream 2.0kb downstream 5525   true Chr17: 10254309-10259833 Glycine max
Glyma.17G128300 2.0kb downstream 2.0kb downstream 2000   false Chr17: 10254309-10256308 Glycine max
Glyma.17G128300 5.0kb upstream 5.0kb upstream 8525   true Chr17: 10256309-10264833 Glycine max
Glyma.17G128300 5.0kb upstream 5.0kb upstream 5000   false Chr17: 10259834-10264833 Glycine max
Glyma.17G128300 5.0kb downstream 5.0kb downstream 8525   true Chr17: 10251309-10259833 Glycine max
Glyma.17G128300 5.0kb downstream 5.0kb downstream 5000   false Chr17: 10251309-10256308 Glycine max
Glyma.17G128300 10.0kb upstream 10.0kb upstream 13525   true Chr17: 10256309-10269833 Glycine max
Glyma.17G128300 10.0kb upstream 10.0kb upstream 10000   false Chr17: 10259834-10269833 Glycine max
Glyma.17G128300 10.0kb downstream 10.0kb downstream 13525   true Chr17: 10246309-10259833 Glycine max
Glyma.17G128300 10.0kb downstream 10.0kb downstream 10000   false Chr17: 10246309-10256308 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041419 5273 Angiosperm View MSA
122305884 5265 Fabidae View MSA
124069606 5270 Rosid View MSA
123746649 5271 Pentapetalae View MSA
122795443 5272 Eudicot View MSA
121350908 5274 Embryophyte View MSA
123427854 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.3844 0.0 91.6304    
cufflinks 25.2841 0.0 115.581 High  
cufflinks 11.3567 0.0 56.0088   Low
cufflinks 34.5026 0.0 158.309 High  
cufflinks 44.5188 0.0 204.505 High  
cufflinks 41.3593 0.0 188.909 High  
cufflinks 35.5614 0.0 163.405 High  
cufflinks 48.9659 0.0 229.859 High  
cufflinks 56.5589 0.0 269.466 High High
cufflinks 3.986       High
cufflinks 1.195       Low
cufflinks 1.481        
cufflinks 5.224       High
cufflinks 5.969       High
cufflinks 3.276        
cufflinks 2.179        
cufflinks 1.643        
cufflinks 2.289        
cufflinks 2.963        
cufflinks 1.769        
cufflinks 2.026        
cufflinks 2.009        
cufflinks 2.706        
cufflinks 1.384       Low
cufflinks 2.112        
cufflinks 1.589        

0 Strain