Gene : Glyma.17G128400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10894:SF0 - NUCLEOLAR PROTEIN 56 Genomic Order:  1284
Name:  ? Glyma.17G128400 Secondary Identifier:  ? PAC:30479169
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G128400 0.5kb upstream 0.5kb upstream 3947   true Chr17: 10267423-10271369 Glycine max
Glyma.17G128400 0.5kb upstream 0.5kb upstream 500   false Chr17: 10270870-10271369 Glycine max
Glyma.17G128400 0.5kb downstream 0.5kb downstream 3947   true Chr17: 10266923-10270869 Glycine max
Glyma.17G128400 0.5kb downstream 0.5kb downstream 500   false Chr17: 10266923-10267422 Glycine max
Glyma.17G128400 1.0kb upstream 1.0kb upstream 4447   true Chr17: 10267423-10271869 Glycine max
Glyma.17G128400 1.0kb upstream 1.0kb upstream 1000   false Chr17: 10270870-10271869 Glycine max
Glyma.17G128400 1.0kb downstream 1.0kb downstream 4447   true Chr17: 10266423-10270869 Glycine max
Glyma.17G128400 1.0kb downstream 1.0kb downstream 1000   false Chr17: 10266423-10267422 Glycine max
Glyma.17G128400 2.0kb upstream 2.0kb upstream 5447   true Chr17: 10267423-10272869 Glycine max
Glyma.17G128400 2.0kb upstream 2.0kb upstream 2000   false Chr17: 10270870-10272869 Glycine max
Glyma.17G128400 2.0kb downstream 2.0kb downstream 5447   true Chr17: 10265423-10270869 Glycine max
Glyma.17G128400 2.0kb downstream 2.0kb downstream 2000   false Chr17: 10265423-10267422 Glycine max
Glyma.17G128400 5.0kb upstream 5.0kb upstream 8447   true Chr17: 10267423-10275869 Glycine max
Glyma.17G128400 5.0kb upstream 5.0kb upstream 5000   false Chr17: 10270870-10275869 Glycine max
Glyma.17G128400 5.0kb downstream 5.0kb downstream 8447   true Chr17: 10262423-10270869 Glycine max
Glyma.17G128400 5.0kb downstream 5.0kb downstream 5000   false Chr17: 10262423-10267422 Glycine max
Glyma.17G128400 10.0kb upstream 10.0kb upstream 13447   true Chr17: 10267423-10280869 Glycine max
Glyma.17G128400 10.0kb upstream 10.0kb upstream 10000   false Chr17: 10270870-10280869 Glycine max
Glyma.17G128400 10.0kb downstream 10.0kb downstream 13447   true Chr17: 10257423-10270869 Glycine max
Glyma.17G128400 10.0kb downstream 10.0kb downstream 10000   false Chr17: 10257423-10267422 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310756 5265 Fabidae View MSA
124068529 5270 Rosid View MSA
123741433 5271 Pentapetalae View MSA
122793119 5272 Eudicot View MSA
122042292 5273 Angiosperm View MSA
121349540 5274 Embryophyte View MSA
123424801 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.0548 0.0 110.341 High  
cufflinks 30.392 0.0 83.748 High  
cufflinks 9.07996 0.0 24.4382   Low
cufflinks 17.9989 0.0 48.1997    
cufflinks 61.1324 0.0 183.29 High High
cufflinks 39.5243 0.0 111.688 High  
cufflinks 25.6018 0.0 69.5384 High  
cufflinks 26.7008 0.0 72.8972 High  
cufflinks 39.7241 0.0 112.486 High  
cufflinks 12.746     High  
cufflinks 2.616       Low
cufflinks 16.078     High  
cufflinks 71.122     High High
cufflinks 102.714     High High
cufflinks 3.385       Low
cufflinks 9.216     High  
cufflinks 10.352     High  
cufflinks 12.418     High  
cufflinks 23.427     High  
cufflinks 4.411        
cufflinks 5.902     High  
cufflinks 5.961        
cufflinks 14.908     High  
cufflinks 3.242       Low
cufflinks 8.55     High  
cufflinks 10.752     High  

0 Strain