Gene : Glyma.17G129100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12961 - CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2 Genomic Order:  1291
Name:  ? Glyma.17G129100 Secondary Identifier:  ? PAC:30479695
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G129100 0.5kb upstream 0.5kb upstream 6414   true Chr17: 10342104-10348517 Glycine max
Glyma.17G129100 0.5kb upstream 0.5kb upstream 500   false Chr17: 10348018-10348517 Glycine max
Glyma.17G129100 0.5kb downstream 0.5kb downstream 6414   true Chr17: 10341604-10348017 Glycine max
Glyma.17G129100 0.5kb downstream 0.5kb downstream 500   false Chr17: 10341604-10342103 Glycine max
Glyma.17G129100 1.0kb upstream 1.0kb upstream 6914   true Chr17: 10342104-10349017 Glycine max
Glyma.17G129100 1.0kb upstream 1.0kb upstream 1000   false Chr17: 10348018-10349017 Glycine max
Glyma.17G129100 1.0kb downstream 1.0kb downstream 6914   true Chr17: 10341104-10348017 Glycine max
Glyma.17G129100 1.0kb downstream 1.0kb downstream 1000   false Chr17: 10341104-10342103 Glycine max
Glyma.17G129100 2.0kb upstream 2.0kb upstream 7914   true Chr17: 10342104-10350017 Glycine max
Glyma.17G129100 2.0kb upstream 2.0kb upstream 2000   false Chr17: 10348018-10350017 Glycine max
Glyma.17G129100 2.0kb downstream 2.0kb downstream 7914   true Chr17: 10340104-10348017 Glycine max
Glyma.17G129100 2.0kb downstream 2.0kb downstream 2000   false Chr17: 10340104-10342103 Glycine max
Glyma.17G129100 5.0kb upstream 5.0kb upstream 10914   true Chr17: 10342104-10353017 Glycine max
Glyma.17G129100 5.0kb upstream 5.0kb upstream 5000   false Chr17: 10348018-10353017 Glycine max
Glyma.17G129100 5.0kb downstream 5.0kb downstream 10914   true Chr17: 10337104-10348017 Glycine max
Glyma.17G129100 5.0kb downstream 5.0kb downstream 5000   false Chr17: 10337104-10342103 Glycine max
Glyma.17G129100 10.0kb upstream 10.0kb upstream 15914   true Chr17: 10342104-10358017 Glycine max
Glyma.17G129100 10.0kb upstream 10.0kb upstream 10000   false Chr17: 10348018-10358017 Glycine max
Glyma.17G129100 10.0kb downstream 10.0kb downstream 15914   true Chr17: 10332104-10348017 Glycine max
Glyma.17G129100 10.0kb downstream 10.0kb downstream 10000   false Chr17: 10332104-10342103 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303387 5265 Fabidae View MSA
124060440 5270 Rosid View MSA
123737600 5271 Pentapetalae View MSA
122792763 5272 Eudicot View MSA
122042143 5273 Angiosperm View MSA
121348897 5274 Embryophyte View MSA
123428033 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.65891 0.0 36.6258    
cufflinks 7.07352 0.0 27.4716    
cufflinks 7.73223 0.0 29.7379    
cufflinks 11.4755 0.0 47.1765   High
cufflinks 10.1569 0.0 38.4359    
cufflinks 5.94079 0.0 23.6898   Low
cufflinks 11.246 0.0 46.4138   High
cufflinks 9.90784 0.0 40.8742    
cufflinks 6.84719 0.0 26.7731    
cufflinks 1.525        
cufflinks 1.356        
cufflinks 1.007       Low
cufflinks 1.446        
cufflinks 1.664        
cufflinks 1.511        
cufflinks 1.616        
cufflinks 0.802       Low
cufflinks 1.281        
cufflinks 1.343        
cufflinks 1.84       High
cufflinks 1.801       High
cufflinks 1.656        
cufflinks 1.273        
cufflinks 1.326        
cufflinks 1.693        
cufflinks 1.225        

0 Strain