Gene : Glyma.17G129600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13780:SF36 - SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT GAMMA-1 Genomic Order:  1296
Name:  ? Glyma.17G129600 Secondary Identifier:  ? PAC:30480697
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G129600 0.5kb upstream 0.5kb upstream 7752   true Chr17: 10378808-10386559 Glycine max
Glyma.17G129600 0.5kb upstream 0.5kb upstream 500   false Chr17: 10378808-10379307 Glycine max
Glyma.17G129600 0.5kb downstream 0.5kb downstream 7752   true Chr17: 10379308-10387059 Glycine max
Glyma.17G129600 0.5kb downstream 0.5kb downstream 500   false Chr17: 10386560-10387059 Glycine max
Glyma.17G129600 1.0kb upstream 1.0kb upstream 8252   true Chr17: 10378308-10386559 Glycine max
Glyma.17G129600 1.0kb upstream 1.0kb upstream 1000   false Chr17: 10378308-10379307 Glycine max
Glyma.17G129600 1.0kb downstream 1.0kb downstream 8252   true Chr17: 10379308-10387559 Glycine max
Glyma.17G129600 1.0kb downstream 1.0kb downstream 1000   false Chr17: 10386560-10387559 Glycine max
Glyma.17G129600 2.0kb upstream 2.0kb upstream 9252   true Chr17: 10377308-10386559 Glycine max
Glyma.17G129600 2.0kb upstream 2.0kb upstream 2000   false Chr17: 10377308-10379307 Glycine max
Glyma.17G129600 2.0kb downstream 2.0kb downstream 9252   true Chr17: 10379308-10388559 Glycine max
Glyma.17G129600 2.0kb downstream 2.0kb downstream 2000   false Chr17: 10386560-10388559 Glycine max
Glyma.17G129600 5.0kb upstream 5.0kb upstream 12252   true Chr17: 10374308-10386559 Glycine max
Glyma.17G129600 5.0kb upstream 5.0kb upstream 5000   false Chr17: 10374308-10379307 Glycine max
Glyma.17G129600 5.0kb downstream 5.0kb downstream 12252   true Chr17: 10379308-10391559 Glycine max
Glyma.17G129600 5.0kb downstream 5.0kb downstream 5000   false Chr17: 10386560-10391559 Glycine max
Glyma.17G129600 10.0kb upstream 10.0kb upstream 17252   true Chr17: 10369308-10386559 Glycine max
Glyma.17G129600 10.0kb upstream 10.0kb upstream 10000   false Chr17: 10369308-10379307 Glycine max
Glyma.17G129600 10.0kb downstream 10.0kb downstream 17252   true Chr17: 10379308-10396559 Glycine max
Glyma.17G129600 10.0kb downstream 10.0kb downstream 10000   false Chr17: 10386560-10396559 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314205 5265 Fabidae View MSA
124068322 5270 Rosid View MSA
123743835 5271 Pentapetalae View MSA
122791351 5272 Eudicot View MSA
122045346 5273 Angiosperm View MSA
121348243 5274 Embryophyte View MSA
123427907 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.6408 0.0 35.7162    
cufflinks 7.47597 0.0 28.2271   Low
cufflinks 17.1792 0.0 63.9011    
cufflinks 17.1188 0.0 69.8361    
cufflinks 17.9438 0.0 61.1962    
cufflinks 15.3645 0.0 46.0405    
cufflinks 18.3492 0.0 71.5366    
cufflinks 17.9954 0.0 61.1099    
cufflinks 32.9494 0.0 131.498 High High
cufflinks 1.785        
cufflinks 32.029     High High
cufflinks 1.811        
cufflinks 0.742        
cufflinks 0.524       Low
cufflinks 39.298     High High
cufflinks 1.078        
cufflinks 4.406        
cufflinks 1.314        
cufflinks 1.037        
cufflinks 1.366        
cufflinks 44.412     High High
cufflinks 1.0        
cufflinks 0.381       Low
cufflinks 16.259     High High
cufflinks 1.365        
cufflinks 24.914     High High

0 Strain