Gene : Glyma.17G130200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10953:SF9 - UBIQUITIN-LIKE MODIFIER-ACTIVATING ENZYME 5 Genomic Order:  1302
Name:  ? Glyma.17G130200 Secondary Identifier:  ? PAC:30480807
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G130200 0.5kb upstream 0.5kb upstream 5976   true Chr17: 10424378-10430353 Glycine max
Glyma.17G130200 0.5kb upstream 0.5kb upstream 500   false Chr17: 10424378-10424877 Glycine max
Glyma.17G130200 0.5kb downstream 0.5kb downstream 5976   true Chr17: 10424878-10430853 Glycine max
Glyma.17G130200 0.5kb downstream 0.5kb downstream 500   false Chr17: 10430354-10430853 Glycine max
Glyma.17G130200 1.0kb upstream 1.0kb upstream 6476   true Chr17: 10423878-10430353 Glycine max
Glyma.17G130200 1.0kb upstream 1.0kb upstream 1000   false Chr17: 10423878-10424877 Glycine max
Glyma.17G130200 1.0kb downstream 1.0kb downstream 6476   true Chr17: 10424878-10431353 Glycine max
Glyma.17G130200 1.0kb downstream 1.0kb downstream 1000   false Chr17: 10430354-10431353 Glycine max
Glyma.17G130200 2.0kb upstream 2.0kb upstream 7476   true Chr17: 10422878-10430353 Glycine max
Glyma.17G130200 2.0kb upstream 2.0kb upstream 2000   false Chr17: 10422878-10424877 Glycine max
Glyma.17G130200 2.0kb downstream 2.0kb downstream 7476   true Chr17: 10424878-10432353 Glycine max
Glyma.17G130200 2.0kb downstream 2.0kb downstream 2000   false Chr17: 10430354-10432353 Glycine max
Glyma.17G130200 5.0kb upstream 5.0kb upstream 10476   true Chr17: 10419878-10430353 Glycine max
Glyma.17G130200 5.0kb upstream 5.0kb upstream 5000   false Chr17: 10419878-10424877 Glycine max
Glyma.17G130200 5.0kb downstream 5.0kb downstream 10476   true Chr17: 10424878-10435353 Glycine max
Glyma.17G130200 5.0kb downstream 5.0kb downstream 5000   false Chr17: 10430354-10435353 Glycine max
Glyma.17G130200 10.0kb upstream 10.0kb upstream 15476   true Chr17: 10414878-10430353 Glycine max
Glyma.17G130200 10.0kb upstream 10.0kb upstream 10000   false Chr17: 10414878-10424877 Glycine max
Glyma.17G130200 10.0kb downstream 10.0kb downstream 15476   true Chr17: 10424878-10440353 Glycine max
Glyma.17G130200 10.0kb downstream 10.0kb downstream 10000   false Chr17: 10430354-10440353 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304595 5265 Fabidae View MSA
124066272 5270 Rosid View MSA
123740899 5271 Pentapetalae View MSA
122785779 5272 Eudicot View MSA
122041922 5273 Angiosperm View MSA
121347564 5274 Embryophyte View MSA
123424275 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.4021 0.0 33.4634    
cufflinks 12.5422 0.0 33.8122    
cufflinks 6.70215 0.0 18.9374   Low
cufflinks 12.7948 0.0 34.4528    
cufflinks 19.0677 0.0 50.872   High
cufflinks 17.7855 0.0 47.4783    
cufflinks 19.8843 0.0 53.0488   High
cufflinks 14.3946 0.0 38.5943    
cufflinks 12.4076 0.0 33.4609    
cufflinks 4.329        
cufflinks 0.706       Low
cufflinks 2.659        
cufflinks 5.998       High
cufflinks 8.449     High High
cufflinks 0.766       Low
cufflinks 3.536        
cufflinks 1.83        
cufflinks 3.883        
cufflinks 4.163        
cufflinks 3.199        
cufflinks 1.63        
cufflinks 3.573        
cufflinks 3.271        
cufflinks 1.726        
cufflinks 3.353        
cufflinks 1.632        

0 Strain