Gene : Glyma.17G130800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11669:SF5 - REPLICATION FACTOR C SUBUNIT 2 Genomic Order:  1308
Name:  ? Glyma.17G130800 Secondary Identifier:  ? PAC:30482145
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G130800 0.5kb upstream 0.5kb upstream 3755   true Chr17: 10469641-10473395 Glycine max
Glyma.17G130800 0.5kb upstream 0.5kb upstream 500   false Chr17: 10469641-10470140 Glycine max
Glyma.17G130800 0.5kb downstream 0.5kb downstream 3755   true Chr17: 10470141-10473895 Glycine max
Glyma.17G130800 0.5kb downstream 0.5kb downstream 500   false Chr17: 10473396-10473895 Glycine max
Glyma.17G130800 1.0kb upstream 1.0kb upstream 4255   true Chr17: 10469141-10473395 Glycine max
Glyma.17G130800 1.0kb upstream 1.0kb upstream 1000   false Chr17: 10469141-10470140 Glycine max
Glyma.17G130800 1.0kb downstream 1.0kb downstream 4255   true Chr17: 10470141-10474395 Glycine max
Glyma.17G130800 1.0kb downstream 1.0kb downstream 1000   false Chr17: 10473396-10474395 Glycine max
Glyma.17G130800 2.0kb upstream 2.0kb upstream 5255   true Chr17: 10468141-10473395 Glycine max
Glyma.17G130800 2.0kb upstream 2.0kb upstream 2000   false Chr17: 10468141-10470140 Glycine max
Glyma.17G130800 2.0kb downstream 2.0kb downstream 5255   true Chr17: 10470141-10475395 Glycine max
Glyma.17G130800 2.0kb downstream 2.0kb downstream 2000   false Chr17: 10473396-10475395 Glycine max
Glyma.17G130800 5.0kb upstream 5.0kb upstream 8255   true Chr17: 10465141-10473395 Glycine max
Glyma.17G130800 5.0kb upstream 5.0kb upstream 5000   false Chr17: 10465141-10470140 Glycine max
Glyma.17G130800 5.0kb downstream 5.0kb downstream 8255   true Chr17: 10470141-10478395 Glycine max
Glyma.17G130800 5.0kb downstream 5.0kb downstream 5000   false Chr17: 10473396-10478395 Glycine max
Glyma.17G130800 10.0kb upstream 10.0kb upstream 13255   true Chr17: 10460141-10473395 Glycine max
Glyma.17G130800 10.0kb upstream 10.0kb upstream 10000   false Chr17: 10460141-10470140 Glycine max
Glyma.17G130800 10.0kb downstream 10.0kb downstream 13255   true Chr17: 10470141-10483395 Glycine max
Glyma.17G130800 10.0kb downstream 10.0kb downstream 10000   false Chr17: 10473396-10483395 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307868 5265 Fabidae View MSA
124067480 5270 Rosid View MSA
123736933 5271 Pentapetalae View MSA
122797574 5272 Eudicot View MSA
122046702 5273 Angiosperm View MSA
121346724 5274 Embryophyte View MSA
123424586 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.401729 0.0 1.52199   Low
cufflinks 7.66495 0.0 21.8901   High
cufflinks 1.08965 0.0 3.91833    
cufflinks 2.20022 0.0 7.43487    
cufflinks 2.95992 0.0 9.61459    
cufflinks 2.57229 0.0 8.5294    
cufflinks 4.19542 0.0 12.9921    
cufflinks 1.31553 0.0 4.66113    
cufflinks 5.59988 0.0 16.6329    
cufflinks 0.726        
cufflinks 0.383       Low
cufflinks 1.253        
cufflinks 1.512        
cufflinks 1.686       High
cufflinks 0.791        
cufflinks 1.285        
cufflinks 0.533       Low
cufflinks 0.727        
cufflinks 3.262       High
cufflinks 0.871        
cufflinks 0.553        
cufflinks 1.05        
cufflinks 2.03       High
cufflinks 0.52       Low
cufflinks 1.044        
cufflinks 0.663        

0 Strain