Gene : Glyma.17G131800 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  1318
Name:  ? Glyma.17G131800 Secondary Identifier:  ? PAC:30479761
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G131800 0.5kb upstream 0.5kb upstream 1031   true Chr17: 10578958-10579988 Glycine max
Glyma.17G131800 0.5kb upstream 0.5kb upstream 500   false Chr17: 10578958-10579457 Glycine max
Glyma.17G131800 0.5kb downstream 0.5kb downstream 1031   true Chr17: 10579458-10580488 Glycine max
Glyma.17G131800 0.5kb downstream 0.5kb downstream 500   false Chr17: 10579989-10580488 Glycine max
Glyma.17G131800 1.0kb upstream 1.0kb upstream 1531   true Chr17: 10578458-10579988 Glycine max
Glyma.17G131800 1.0kb upstream 1.0kb upstream 1000   false Chr17: 10578458-10579457 Glycine max
Glyma.17G131800 1.0kb downstream 1.0kb downstream 1531   true Chr17: 10579458-10580988 Glycine max
Glyma.17G131800 1.0kb downstream 1.0kb downstream 1000   false Chr17: 10579989-10580988 Glycine max
Glyma.17G131800 2.0kb upstream 2.0kb upstream 2531   true Chr17: 10577458-10579988 Glycine max
Glyma.17G131800 2.0kb upstream 2.0kb upstream 2000   false Chr17: 10577458-10579457 Glycine max
Glyma.17G131800 2.0kb downstream 2.0kb downstream 2531   true Chr17: 10579458-10581988 Glycine max
Glyma.17G131800 2.0kb downstream 2.0kb downstream 2000   false Chr17: 10579989-10581988 Glycine max
Glyma.17G131800 5.0kb upstream 5.0kb upstream 5531   true Chr17: 10574458-10579988 Glycine max
Glyma.17G131800 5.0kb upstream 5.0kb upstream 5000   false Chr17: 10574458-10579457 Glycine max
Glyma.17G131800 5.0kb downstream 5.0kb downstream 5531   true Chr17: 10579458-10584988 Glycine max
Glyma.17G131800 5.0kb downstream 5.0kb downstream 5000   false Chr17: 10579989-10584988 Glycine max
Glyma.17G131800 10.0kb upstream 10.0kb upstream 10531   true Chr17: 10569458-10579988 Glycine max
Glyma.17G131800 10.0kb upstream 10.0kb upstream 10000   false Chr17: 10569458-10579457 Glycine max
Glyma.17G131800 10.0kb downstream 10.0kb downstream 10531   true Chr17: 10579458-10589988 Glycine max
Glyma.17G131800 10.0kb downstream 10.0kb downstream 10000   false Chr17: 10579989-10589988 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303157 5265 Fabidae View MSA
124070637 5270 Rosid View MSA
123747343 5271 Pentapetalae View MSA
122787056 5272 Eudicot View MSA
122049572 5273 Angiosperm View MSA
121351578 5274 Embryophyte View MSA
123382234 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.148522 0.0 0.614753 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0489154 0.0 0.221389 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 9.354     High High
cufflinks 2.264        
cufflinks 1.537        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.223        
cufflinks 0.327        
cufflinks 137.755     High High
cufflinks 0.347        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.272        
cufflinks 2.931        
cufflinks 0.17       Low
cufflinks 0.395        
cufflinks 1.003        
cufflinks 0.274        
cufflinks 3.498        

0 Strain