Gene : Glyma.17G121100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13677:SF0 - PROTEIN F53H1.3, ISOFORM A Genomic Order:  1211
Name:  ? Glyma.17G121100 Secondary Identifier:  ? PAC:30481934
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G121100 0.5kb upstream 0.5kb upstream 5234   true Chr17: 9645970-9651203 Glycine max
Glyma.17G121100 0.5kb upstream 0.5kb upstream 500   false Chr17: 9650704-9651203 Glycine max
Glyma.17G121100 0.5kb downstream 0.5kb downstream 5234   true Chr17: 9645470-9650703 Glycine max
Glyma.17G121100 0.5kb downstream 0.5kb downstream 500   false Chr17: 9645470-9645969 Glycine max
Glyma.17G121100 1.0kb upstream 1.0kb upstream 5734   true Chr17: 9645970-9651703 Glycine max
Glyma.17G121100 1.0kb upstream 1.0kb upstream 1000   false Chr17: 9650704-9651703 Glycine max
Glyma.17G121100 1.0kb downstream 1.0kb downstream 5734   true Chr17: 9644970-9650703 Glycine max
Glyma.17G121100 1.0kb downstream 1.0kb downstream 1000   false Chr17: 9644970-9645969 Glycine max
Glyma.17G121100 2.0kb upstream 2.0kb upstream 6734   true Chr17: 9645970-9652703 Glycine max
Glyma.17G121100 2.0kb upstream 2.0kb upstream 2000   false Chr17: 9650704-9652703 Glycine max
Glyma.17G121100 2.0kb downstream 2.0kb downstream 6734   true Chr17: 9643970-9650703 Glycine max
Glyma.17G121100 2.0kb downstream 2.0kb downstream 2000   false Chr17: 9643970-9645969 Glycine max
Glyma.17G121100 5.0kb upstream 5.0kb upstream 9734   true Chr17: 9645970-9655703 Glycine max
Glyma.17G121100 5.0kb upstream 5.0kb upstream 5000   false Chr17: 9650704-9655703 Glycine max
Glyma.17G121100 5.0kb downstream 5.0kb downstream 9734   true Chr17: 9640970-9650703 Glycine max
Glyma.17G121100 5.0kb downstream 5.0kb downstream 5000   false Chr17: 9640970-9645969 Glycine max
Glyma.17G121100 10.0kb upstream 10.0kb upstream 14734   true Chr17: 9645970-9660703 Glycine max
Glyma.17G121100 10.0kb upstream 10.0kb upstream 10000   false Chr17: 9650704-9660703 Glycine max
Glyma.17G121100 10.0kb downstream 10.0kb downstream 14734   true Chr17: 9635970-9650703 Glycine max
Glyma.17G121100 10.0kb downstream 10.0kb downstream 10000   false Chr17: 9635970-9645969 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310377 5265 Fabidae View MSA
124067041 5270 Rosid View MSA
123739049 5271 Pentapetalae View MSA
122789935 5272 Eudicot View MSA
122046522 5273 Angiosperm View MSA
121346566 5274 Embryophyte View MSA
123427841 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.54115 0.0 19.1254    
cufflinks 4.53924 0.0 18.9876    
cufflinks 5.09725 0.0 22.6719    
cufflinks 4.61251 0.0 21.1147    
cufflinks 3.5755 0.0 16.1323    
cufflinks 2.53623 0.0 12.0573   Low
cufflinks 3.15535 0.0 14.6546   Low
cufflinks 5.68116 0.0 26.5845   High
cufflinks 5.28114 0.0 21.3355    
cufflinks 0.329       Low
cufflinks 0.371        
cufflinks 0.691        
cufflinks 0.605        
cufflinks 0.656        
cufflinks 0.324       Low
cufflinks 0.662        
cufflinks 0.22       Low
cufflinks 0.844       High
cufflinks 0.828       High
cufflinks 0.679        
cufflinks 0.477        
cufflinks 0.779        
cufflinks 0.639        
cufflinks 0.554        
cufflinks 0.717        
cufflinks 0.286       Low

0 Strain