Gene : Glyma.17G122300 G. max Wm82.a2.v1
Defline:  (1 of 8) 1.3.1.78 - Arogenate dehydrogenase (NADP(+)) / TyrAAT2 Genomic Order:  1223
Name:  ? Glyma.17G122300 Secondary Identifier:  ? PAC:30482220
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-3461 Glycine max pathologic  
Gmax PWY-3481 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G122300 0.5kb upstream 0.5kb upstream 4722   true Chr17: 9785932-9790653 Glycine max
Glyma.17G122300 0.5kb upstream 0.5kb upstream 500   false Chr17: 9790154-9790653 Glycine max
Glyma.17G122300 0.5kb downstream 0.5kb downstream 4722   true Chr17: 9785432-9790153 Glycine max
Glyma.17G122300 0.5kb downstream 0.5kb downstream 500   false Chr17: 9785432-9785931 Glycine max
Glyma.17G122300 1.0kb upstream 1.0kb upstream 5222   true Chr17: 9785932-9791153 Glycine max
Glyma.17G122300 1.0kb upstream 1.0kb upstream 1000   false Chr17: 9790154-9791153 Glycine max
Glyma.17G122300 1.0kb downstream 1.0kb downstream 5222   true Chr17: 9784932-9790153 Glycine max
Glyma.17G122300 1.0kb downstream 1.0kb downstream 1000   false Chr17: 9784932-9785931 Glycine max
Glyma.17G122300 2.0kb upstream 2.0kb upstream 6222   true Chr17: 9785932-9792153 Glycine max
Glyma.17G122300 2.0kb upstream 2.0kb upstream 2000   false Chr17: 9790154-9792153 Glycine max
Glyma.17G122300 2.0kb downstream 2.0kb downstream 6222   true Chr17: 9783932-9790153 Glycine max
Glyma.17G122300 2.0kb downstream 2.0kb downstream 2000   false Chr17: 9783932-9785931 Glycine max
Glyma.17G122300 5.0kb upstream 5.0kb upstream 9222   true Chr17: 9785932-9795153 Glycine max
Glyma.17G122300 5.0kb upstream 5.0kb upstream 5000   false Chr17: 9790154-9795153 Glycine max
Glyma.17G122300 5.0kb downstream 5.0kb downstream 9222   true Chr17: 9780932-9790153 Glycine max
Glyma.17G122300 5.0kb downstream 5.0kb downstream 5000   false Chr17: 9780932-9785931 Glycine max
Glyma.17G122300 10.0kb upstream 10.0kb upstream 14222   true Chr17: 9785932-9800153 Glycine max
Glyma.17G122300 10.0kb upstream 10.0kb upstream 10000   false Chr17: 9790154-9800153 Glycine max
Glyma.17G122300 10.0kb downstream 10.0kb downstream 14222   true Chr17: 9775932-9790153 Glycine max
Glyma.17G122300 10.0kb downstream 10.0kb downstream 10000   false Chr17: 9775932-9785931 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121691084 5273 Angiosperm View MSA
122314160 5265 Fabidae View MSA
124038185 5270 Rosid View MSA
123646805 5271 Pentapetalae View MSA
122680847 5272 Eudicot View MSA
121351682 5274 Embryophyte View MSA
123427304 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.93373 0.0 11.4258    
cufflinks 3.05285 0.0 11.9413    
cufflinks 2.11297 0.0 9.23983    
cufflinks 1.95721 0.0 8.67138    
cufflinks 2.62958 0.0 7.94721    
cufflinks 2.66723 0.0 8.08647    
cufflinks 3.74844 0.0 13.3248   High
cufflinks 1.3834 0.0 6.76988   Low
cufflinks 2.67253 0.0 10.7726    
cufflinks 0.779        
cufflinks 0.208       Low
cufflinks 0.77        
cufflinks 0.492        
cufflinks 0.56        
cufflinks 0.311        
cufflinks 0.332        
cufflinks 1.215       High
cufflinks 0.812        
cufflinks 1.391       High
cufflinks 0.32        
cufflinks 0.348        
cufflinks 0.338        
cufflinks 1.058       High
cufflinks 0.323        
cufflinks 0.329        
cufflinks 0.771        

0 Strain