Gene : Glyma.17G123300 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR24031:SF301 - ATP-DEPENDENT RNA HELICASE DDX18 Genomic Order:  1233
Name:  ? Glyma.17G123300 Secondary Identifier:  ? PAC:30479093
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G123300 0.5kb upstream 0.5kb upstream 6492   true Chr17: 9822955-9829446 Glycine max
Glyma.17G123300 0.5kb upstream 0.5kb upstream 500   false Chr17: 9828947-9829446 Glycine max
Glyma.17G123300 0.5kb downstream 0.5kb downstream 6492   true Chr17: 9822455-9828946 Glycine max
Glyma.17G123300 0.5kb downstream 0.5kb downstream 500   false Chr17: 9822455-9822954 Glycine max
Glyma.17G123300 1.0kb upstream 1.0kb upstream 6992   true Chr17: 9822955-9829946 Glycine max
Glyma.17G123300 1.0kb upstream 1.0kb upstream 1000   false Chr17: 9828947-9829946 Glycine max
Glyma.17G123300 1.0kb downstream 1.0kb downstream 6992   true Chr17: 9821955-9828946 Glycine max
Glyma.17G123300 1.0kb downstream 1.0kb downstream 1000   false Chr17: 9821955-9822954 Glycine max
Glyma.17G123300 2.0kb upstream 2.0kb upstream 7992   true Chr17: 9822955-9830946 Glycine max
Glyma.17G123300 2.0kb upstream 2.0kb upstream 2000   false Chr17: 9828947-9830946 Glycine max
Glyma.17G123300 2.0kb downstream 2.0kb downstream 7992   true Chr17: 9820955-9828946 Glycine max
Glyma.17G123300 2.0kb downstream 2.0kb downstream 2000   false Chr17: 9820955-9822954 Glycine max
Glyma.17G123300 5.0kb upstream 5.0kb upstream 10992   true Chr17: 9822955-9833946 Glycine max
Glyma.17G123300 5.0kb upstream 5.0kb upstream 5000   false Chr17: 9828947-9833946 Glycine max
Glyma.17G123300 5.0kb downstream 5.0kb downstream 10992   true Chr17: 9817955-9828946 Glycine max
Glyma.17G123300 5.0kb downstream 5.0kb downstream 5000   false Chr17: 9817955-9822954 Glycine max
Glyma.17G123300 10.0kb upstream 10.0kb upstream 15992   true Chr17: 9822955-9838946 Glycine max
Glyma.17G123300 10.0kb upstream 10.0kb upstream 10000   false Chr17: 9828947-9838946 Glycine max
Glyma.17G123300 10.0kb downstream 10.0kb downstream 15992   true Chr17: 9812955-9828946 Glycine max
Glyma.17G123300 10.0kb downstream 10.0kb downstream 10000   false Chr17: 9812955-9822954 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311556 5265 Fabidae View MSA
124062286 5270 Rosid View MSA
123738458 5271 Pentapetalae View MSA
122788129 5272 Eudicot View MSA
122047465 5273 Angiosperm View MSA
121344633 5274 Embryophyte View MSA
123424646 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.58909 0.0 18.1547    
cufflinks 5.86001 0.0 16.3068    
cufflinks 2.24573 0.0 7.02475   Low
cufflinks 4.51366 0.0 12.8815    
cufflinks 9.10058 0.0 24.5737   High
cufflinks 5.68793 0.0 15.8844    
cufflinks 5.25735 0.0 14.8001    
cufflinks 5.79027 0.0 16.1119    
cufflinks 5.92054 0.0 16.4694    
cufflinks 1.633        
cufflinks 0.395       Low
cufflinks 2.027        
cufflinks 4.313       High
cufflinks 7.142     High High
cufflinks 0.53       Low
cufflinks 1.483        
cufflinks 1.371        
cufflinks 1.94        
cufflinks 2.413        
cufflinks 1.036        
cufflinks 0.736        
cufflinks 1.184        
cufflinks 2.779        
cufflinks 0.476       Low
cufflinks 1.185        
cufflinks 1.241        

0 Strain