Gene : Glyma.17G123700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13384:SF19 - G PATCH DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  1237
Name:  ? Glyma.17G123700 Secondary Identifier:  ? PAC:30478900
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G123700 0.5kb upstream 0.5kb upstream 12932   true Chr17: 9854379-9867310 Glycine max
Glyma.17G123700 0.5kb upstream 0.5kb upstream 500   false Chr17: 9854379-9854878 Glycine max
Glyma.17G123700 0.5kb downstream 0.5kb downstream 12932   true Chr17: 9854879-9867810 Glycine max
Glyma.17G123700 0.5kb downstream 0.5kb downstream 500   false Chr17: 9867311-9867810 Glycine max
Glyma.17G123700 1.0kb upstream 1.0kb upstream 13432   true Chr17: 9853879-9867310 Glycine max
Glyma.17G123700 1.0kb upstream 1.0kb upstream 1000   false Chr17: 9853879-9854878 Glycine max
Glyma.17G123700 1.0kb downstream 1.0kb downstream 13432   true Chr17: 9854879-9868310 Glycine max
Glyma.17G123700 1.0kb downstream 1.0kb downstream 1000   false Chr17: 9867311-9868310 Glycine max
Glyma.17G123700 2.0kb upstream 2.0kb upstream 14432   true Chr17: 9852879-9867310 Glycine max
Glyma.17G123700 2.0kb upstream 2.0kb upstream 2000   false Chr17: 9852879-9854878 Glycine max
Glyma.17G123700 2.0kb downstream 2.0kb downstream 14432   true Chr17: 9854879-9869310 Glycine max
Glyma.17G123700 2.0kb downstream 2.0kb downstream 2000   false Chr17: 9867311-9869310 Glycine max
Glyma.17G123700 5.0kb upstream 5.0kb upstream 17432   true Chr17: 9849879-9867310 Glycine max
Glyma.17G123700 5.0kb upstream 5.0kb upstream 5000   false Chr17: 9849879-9854878 Glycine max
Glyma.17G123700 5.0kb downstream 5.0kb downstream 17432   true Chr17: 9854879-9872310 Glycine max
Glyma.17G123700 5.0kb downstream 5.0kb downstream 5000   false Chr17: 9867311-9872310 Glycine max
Glyma.17G123700 10.0kb upstream 10.0kb upstream 22432   true Chr17: 9844879-9867310 Glycine max
Glyma.17G123700 10.0kb upstream 10.0kb upstream 10000   false Chr17: 9844879-9854878 Glycine max
Glyma.17G123700 10.0kb downstream 10.0kb downstream 22432   true Chr17: 9854879-9877310 Glycine max
Glyma.17G123700 10.0kb downstream 10.0kb downstream 10000   false Chr17: 9867311-9877310 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305648 5265 Fabidae View MSA
124067571 5270 Rosid View MSA
123746578 5271 Pentapetalae View MSA
122793732 5272 Eudicot View MSA
122044115 5273 Angiosperm View MSA
121345398 5274 Embryophyte View MSA
123424133 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.63916 0.0 20.3821   High
cufflinks 7.143 0.0 19.0575    
cufflinks 7.9271 0.0 21.1611   High
cufflinks 5.43557 0.0 14.5598    
cufflinks 5.86929 0.0 15.7001    
cufflinks 5.04564 0.0 13.5583   Low
cufflinks 6.74465 0.0 18.0031    
cufflinks 5.4167 0.0 14.514   Low
cufflinks 7.37885 0.0 19.6858    
cufflinks 1.821       Low
cufflinks 1.87        
cufflinks 3.031        
cufflinks 2.254        
cufflinks 2.608        
cufflinks 2.69        
cufflinks 3.231       High
cufflinks 1.438       Low
cufflinks 2.802        
cufflinks 2.791        
cufflinks 3.586       High
cufflinks 1.717       Low
cufflinks 3.521       High
cufflinks 2.782        
cufflinks 1.978        
cufflinks 3.085        
cufflinks 1.94        

0 Strain