Gene : Glyma.17G125500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24058//PTHR24058:SF58 - DUAL SPECIFICITY PROTEIN KINASE Genomic Order:  1255
Name:  ? Glyma.17G125500 Secondary Identifier:  ? PAC:30481000
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G125500 0.5kb upstream 0.5kb upstream 4542   true Chr17: 10004936-10009477 Glycine max
Glyma.17G125500 0.5kb upstream 0.5kb upstream 500   false Chr17: 10008978-10009477 Glycine max
Glyma.17G125500 0.5kb downstream 0.5kb downstream 4542   true Chr17: 10004436-10008977 Glycine max
Glyma.17G125500 0.5kb downstream 0.5kb downstream 500   false Chr17: 10004436-10004935 Glycine max
Glyma.17G125500 1.0kb upstream 1.0kb upstream 5042   true Chr17: 10004936-10009977 Glycine max
Glyma.17G125500 1.0kb upstream 1.0kb upstream 1000   false Chr17: 10008978-10009977 Glycine max
Glyma.17G125500 1.0kb downstream 1.0kb downstream 5042   true Chr17: 10003936-10008977 Glycine max
Glyma.17G125500 1.0kb downstream 1.0kb downstream 1000   false Chr17: 10003936-10004935 Glycine max
Glyma.17G125500 2.0kb upstream 2.0kb upstream 6042   true Chr17: 10004936-10010977 Glycine max
Glyma.17G125500 2.0kb upstream 2.0kb upstream 2000   false Chr17: 10008978-10010977 Glycine max
Glyma.17G125500 2.0kb downstream 2.0kb downstream 6042   true Chr17: 10002936-10008977 Glycine max
Glyma.17G125500 2.0kb downstream 2.0kb downstream 2000   false Chr17: 10002936-10004935 Glycine max
Glyma.17G125500 5.0kb upstream 5.0kb upstream 9042   true Chr17: 10004936-10013977 Glycine max
Glyma.17G125500 5.0kb upstream 5.0kb upstream 5000   false Chr17: 10008978-10013977 Glycine max
Glyma.17G125500 5.0kb downstream 5.0kb downstream 9042   true Chr17: 9999936-10008977 Glycine max
Glyma.17G125500 5.0kb downstream 5.0kb downstream 5000   false Chr17: 9999936-10004935 Glycine max
Glyma.17G125500 10.0kb upstream 10.0kb upstream 14042   true Chr17: 10004936-10018977 Glycine max
Glyma.17G125500 10.0kb upstream 10.0kb upstream 10000   false Chr17: 10008978-10018977 Glycine max
Glyma.17G125500 10.0kb downstream 10.0kb downstream 14042   true Chr17: 9994936-10008977 Glycine max
Glyma.17G125500 10.0kb downstream 10.0kb downstream 10000   false Chr17: 9994936-10004935 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122244158 5265 Fabidae Singleton cluster - no MSA
124066575 5270 Rosid View MSA
123751115 5271 Pentapetalae View MSA
122792813 5272 Eudicot View MSA
122041750 5273 Angiosperm View MSA
121349585 5274 Embryophyte View MSA
123426533 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 50.0787 0.0 255.317 High High
cufflinks 21.7033 0.0 95.9299 High  
cufflinks 44.955 0.0 223.946 High  
cufflinks 21.7114 0.0 95.5666 High  
cufflinks 32.3655 0.0 149.338 High  
cufflinks 54.0529 0.0 283.984 High High
cufflinks 17.3912 0.0 76.3621   Low
cufflinks 27.2471 0.0 122.254 High  
cufflinks 31.1249 0.0 142.614 High  
cufflinks 2.29       Low
cufflinks 6.695     High High
cufflinks 3.933        
cufflinks 3.771        
cufflinks 3.519        
cufflinks 10.254     High High
cufflinks 3.421        
cufflinks 5.001        
cufflinks 3.372        
cufflinks 2.92       Low
cufflinks 3.552        
cufflinks 5.641        
cufflinks 3.644        
cufflinks 3.848        
cufflinks 6.154     High High
cufflinks 3.234        
cufflinks 5.607        

0 Strain