Gene : Glyma.17G112000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10891//PTHR10891:SF546 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN Genomic Order:  1120
Name:  ? Glyma.17G112000 Secondary Identifier:  ? PAC:30478583
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G112000 0.5kb upstream 0.5kb upstream 1688   true Chr17: 8807215-8808902 Glycine max
Glyma.17G112000 0.5kb upstream 0.5kb upstream 500   false Chr17: 8807215-8807714 Glycine max
Glyma.17G112000 0.5kb downstream 0.5kb downstream 1688   true Chr17: 8807715-8809402 Glycine max
Glyma.17G112000 0.5kb downstream 0.5kb downstream 500   false Chr17: 8808903-8809402 Glycine max
Glyma.17G112000 1.0kb upstream 1.0kb upstream 2188   true Chr17: 8806715-8808902 Glycine max
Glyma.17G112000 1.0kb upstream 1.0kb upstream 1000   false Chr17: 8806715-8807714 Glycine max
Glyma.17G112000 1.0kb downstream 1.0kb downstream 2188   true Chr17: 8807715-8809902 Glycine max
Glyma.17G112000 1.0kb downstream 1.0kb downstream 1000   false Chr17: 8808903-8809902 Glycine max
Glyma.17G112000 2.0kb upstream 2.0kb upstream 3188   true Chr17: 8805715-8808902 Glycine max
Glyma.17G112000 2.0kb upstream 2.0kb upstream 2000   false Chr17: 8805715-8807714 Glycine max
Glyma.17G112000 2.0kb downstream 2.0kb downstream 3188   true Chr17: 8807715-8810902 Glycine max
Glyma.17G112000 2.0kb downstream 2.0kb downstream 2000   false Chr17: 8808903-8810902 Glycine max
Glyma.17G112000 5.0kb upstream 5.0kb upstream 6188   true Chr17: 8802715-8808902 Glycine max
Glyma.17G112000 5.0kb upstream 5.0kb upstream 5000   false Chr17: 8802715-8807714 Glycine max
Glyma.17G112000 5.0kb downstream 5.0kb downstream 6188   true Chr17: 8807715-8813902 Glycine max
Glyma.17G112000 5.0kb downstream 5.0kb downstream 5000   false Chr17: 8808903-8813902 Glycine max
Glyma.17G112000 10.0kb upstream 10.0kb upstream 11188   true Chr17: 8797715-8808902 Glycine max
Glyma.17G112000 10.0kb upstream 10.0kb upstream 10000   false Chr17: 8797715-8807714 Glycine max
Glyma.17G112000 10.0kb downstream 10.0kb downstream 11188   true Chr17: 8807715-8818902 Glycine max
Glyma.17G112000 10.0kb downstream 10.0kb downstream 10000   false Chr17: 8808903-8818902 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028011 5273 Angiosperm View MSA
122302288 5265 Fabidae View MSA
124071091 5270 Rosid View MSA
123752599 5271 Pentapetalae View MSA
122791242 5272 Eudicot View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.64804 0.0 19.9148   High
cufflinks 0.0604281 0.0 0.250583 Low  
cufflinks 0.0775825 0.0 0.316791 Low  
cufflinks 0.0567839 0.0 0.236401 Low  
cufflinks 0.349946 0.0 1.34867    
cufflinks 1.1069 0.0 4.03473    
cufflinks 0.0375049 0.0 0.16153 Low Low
cufflinks 0.144666 0.0 0.575849 Low  
cufflinks 0.544502 0.0 2.05572    
cufflinks 0.168        
cufflinks 0.184        
cufflinks 0.075     Low  
cufflinks 0.683        
cufflinks 0.431        
cufflinks 0.016     Low Low
cufflinks 8.124     High High
cufflinks 0.583        
cufflinks 0.126        
cufflinks 0.044     Low Low
cufflinks 12.457     High High
cufflinks 0.306        
cufflinks 9.261     High High
cufflinks 2.511        
cufflinks 0.017     Low Low
cufflinks 9.277     High High
cufflinks 0.394        

0 Strain