Gene : Glyma.17G112400 G. max Wm82.a2.v1
Defline:  (1 of 8) 2.4.1.144 - Beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase / acetylglucosaminyltransferase III Genomic Order:  1124
Name:  ? Glyma.17G112400 Secondary Identifier:  ? PAC:30479253
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7426 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G112400 0.5kb upstream 0.5kb upstream 3248   true Chr17: 8863715-8866962 Glycine max
Glyma.17G112400 0.5kb upstream 0.5kb upstream 500   false Chr17: 8863715-8864214 Glycine max
Glyma.17G112400 0.5kb downstream 0.5kb downstream 3248   true Chr17: 8864215-8867462 Glycine max
Glyma.17G112400 0.5kb downstream 0.5kb downstream 500   false Chr17: 8866963-8867462 Glycine max
Glyma.17G112400 1.0kb upstream 1.0kb upstream 3748   true Chr17: 8863215-8866962 Glycine max
Glyma.17G112400 1.0kb upstream 1.0kb upstream 1000   false Chr17: 8863215-8864214 Glycine max
Glyma.17G112400 1.0kb downstream 1.0kb downstream 3748   true Chr17: 8864215-8867962 Glycine max
Glyma.17G112400 1.0kb downstream 1.0kb downstream 1000   false Chr17: 8866963-8867962 Glycine max
Glyma.17G112400 2.0kb upstream 2.0kb upstream 4748   true Chr17: 8862215-8866962 Glycine max
Glyma.17G112400 2.0kb upstream 2.0kb upstream 2000   false Chr17: 8862215-8864214 Glycine max
Glyma.17G112400 2.0kb downstream 2.0kb downstream 4748   true Chr17: 8864215-8868962 Glycine max
Glyma.17G112400 2.0kb downstream 2.0kb downstream 2000   false Chr17: 8866963-8868962 Glycine max
Glyma.17G112400 5.0kb upstream 5.0kb upstream 7748   true Chr17: 8859215-8866962 Glycine max
Glyma.17G112400 5.0kb upstream 5.0kb upstream 5000   false Chr17: 8859215-8864214 Glycine max
Glyma.17G112400 5.0kb downstream 5.0kb downstream 7748   true Chr17: 8864215-8871962 Glycine max
Glyma.17G112400 5.0kb downstream 5.0kb downstream 5000   false Chr17: 8866963-8871962 Glycine max
Glyma.17G112400 10.0kb upstream 10.0kb upstream 12748   true Chr17: 8854215-8866962 Glycine max
Glyma.17G112400 10.0kb upstream 10.0kb upstream 10000   false Chr17: 8854215-8864214 Glycine max
Glyma.17G112400 10.0kb downstream 10.0kb downstream 12748   true Chr17: 8864215-8876962 Glycine max
Glyma.17G112400 10.0kb downstream 10.0kb downstream 10000   false Chr17: 8866963-8876962 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303813 5265 Fabidae View MSA
124067293 5270 Rosid View MSA
123743296 5271 Pentapetalae View MSA
122789853 5272 Eudicot View MSA
122046234 5273 Angiosperm View MSA
121351107 5274 Embryophyte View MSA
123424609 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.19361 0.0 8.02841    
cufflinks 1.06774 0.0 4.67617   Low
cufflinks 1.05531 0.0 4.58706   Low
cufflinks 1.65994 0.0 9.9322    
cufflinks 2.91656 0.0 9.73422   High
cufflinks 1.51102 0.0 6.00403    
cufflinks 1.90539 0.0 10.6892    
cufflinks 1.63611 0.0 6.37182    
cufflinks 2.00423 0.0 7.38609    
cufflinks 0.236        
cufflinks 0.46        
cufflinks 0.281        
cufflinks 0.953       High
cufflinks 1.165       High
cufflinks 0.196       Low
cufflinks 0.255        
cufflinks 0.191       Low
cufflinks 0.53        
cufflinks 0.511        
cufflinks 0.349        
cufflinks 0.38        
cufflinks 0.396        
cufflinks 0.424        
cufflinks 0.783       High
cufflinks 0.271        
cufflinks 0.232        

0 Strain