Gene : Glyma.17G112600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24007:SF8 - BRIZ1 Genomic Order:  1126
Name:  ? Glyma.17G112600 Secondary Identifier:  ? PAC:30478918
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G112600 0.5kb upstream 0.5kb upstream 5437   true Chr17: 8889468-8894904 Glycine max
Glyma.17G112600 0.5kb upstream 0.5kb upstream 500   false Chr17: 8894405-8894904 Glycine max
Glyma.17G112600 0.5kb downstream 0.5kb downstream 5437   true Chr17: 8888968-8894404 Glycine max
Glyma.17G112600 0.5kb downstream 0.5kb downstream 500   false Chr17: 8888968-8889467 Glycine max
Glyma.17G112600 1.0kb upstream 1.0kb upstream 5937   true Chr17: 8889468-8895404 Glycine max
Glyma.17G112600 1.0kb upstream 1.0kb upstream 1000   false Chr17: 8894405-8895404 Glycine max
Glyma.17G112600 1.0kb downstream 1.0kb downstream 5937   true Chr17: 8888468-8894404 Glycine max
Glyma.17G112600 1.0kb downstream 1.0kb downstream 1000   false Chr17: 8888468-8889467 Glycine max
Glyma.17G112600 2.0kb upstream 2.0kb upstream 6937   true Chr17: 8889468-8896404 Glycine max
Glyma.17G112600 2.0kb upstream 2.0kb upstream 2000   false Chr17: 8894405-8896404 Glycine max
Glyma.17G112600 2.0kb downstream 2.0kb downstream 6937   true Chr17: 8887468-8894404 Glycine max
Glyma.17G112600 2.0kb downstream 2.0kb downstream 2000   false Chr17: 8887468-8889467 Glycine max
Glyma.17G112600 5.0kb upstream 5.0kb upstream 9937   true Chr17: 8889468-8899404 Glycine max
Glyma.17G112600 5.0kb upstream 5.0kb upstream 5000   false Chr17: 8894405-8899404 Glycine max
Glyma.17G112600 5.0kb downstream 5.0kb downstream 9937   true Chr17: 8884468-8894404 Glycine max
Glyma.17G112600 5.0kb downstream 5.0kb downstream 5000   false Chr17: 8884468-8889467 Glycine max
Glyma.17G112600 10.0kb upstream 10.0kb upstream 14937   true Chr17: 8889468-8904404 Glycine max
Glyma.17G112600 10.0kb upstream 10.0kb upstream 10000   false Chr17: 8894405-8904404 Glycine max
Glyma.17G112600 10.0kb downstream 10.0kb downstream 14937   true Chr17: 8879468-8894404 Glycine max
Glyma.17G112600 10.0kb downstream 10.0kb downstream 10000   false Chr17: 8879468-8889467 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300794 5265 Fabidae View MSA
124062945 5270 Rosid View MSA
123739416 5271 Pentapetalae View MSA
122796180 5272 Eudicot View MSA
122049879 5273 Angiosperm View MSA
121344447 5274 Embryophyte View MSA
123425921 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.74052 0.0 16.1456    
cufflinks 5.94924 0.0 16.6796    
cufflinks 7.68261 0.0 21.0284   High
cufflinks 6.66699 0.0 18.4797    
cufflinks 5.30243 0.0 15.0513   Low
cufflinks 8.01187 0.0 21.8894   High
cufflinks 6.68058 0.0 18.5427    
cufflinks 6.19602 0.0 17.2864    
cufflinks 5.89108 0.0 16.5224    
cufflinks 1.903       Low
cufflinks 2.186        
cufflinks 2.677       High
cufflinks 2.105        
cufflinks 2.001        
cufflinks 2.305        
cufflinks 2.183        
cufflinks 2.215        
cufflinks 2.472        
cufflinks 2.872       High
cufflinks 2.414        
cufflinks 2.248        
cufflinks 2.128        
cufflinks 1.539       Low
cufflinks 2.885       High
cufflinks 2.314        
cufflinks 2.567        

0 Strain